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PDBeChem : Atoms of Molecule
Molecule : TV5
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 61
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C1 |
C |
C1 |
N |
N |
N |
0 |
5.781 |
-2.644 |
1.392 |
2 |
C2 |
C |
C2 |
N |
N |
N |
0 |
4.586 |
-3.173 |
0.597 |
3 |
C3 |
C |
C3 |
N |
N |
N |
0 |
3.987 |
-4.381 |
1.32 |
4 |
C8 |
C |
C7 |
N |
N |
N |
0 |
0.743 |
-0.753 |
-1.773 |
5 |
C5 |
C |
C4 |
N |
Y |
N |
0 |
3.543 |
-2.091 |
0.479 |
6 |
C6 |
C |
C5 |
N |
Y |
N |
0 |
2.717 |
-2.053 |
-0.626 |
7 |
C7 |
C |
C6 |
N |
Y |
N |
0 |
1.751 |
-1.051 |
-0.737 |
8 |
C12 |
C |
C9 |
N |
Y |
N |
0 |
-2.341 |
0.184 |
-1.933 |
9 |
O9 |
O |
O1 |
N |
N |
N |
0 |
0.582 |
-1.396 |
-2.791 |
10 |
C11 |
C |
C8 |
N |
N |
N |
0 |
-1.058 |
0.923 |
-2.215 |
11 |
C13 |
C |
C10 |
N |
Y |
N |
0 |
-3.213 |
0.671 |
-0.978 |
12 |
C14 |
C |
C11 |
N |
Y |
N |
0 |
-4.394 |
-0.013 |
-0.729 |
13 |
C15 |
C |
C12 |
N |
Y |
N |
0 |
-4.653 |
-1.167 |
-1.454 |
14 |
N18 |
N |
N1 |
N |
Y |
N |
0 |
-2.619 |
-0.917 |
-2.603 |
15 |
C19 |
C |
C13 |
R |
N |
N |
0 |
0.516 |
0.829 |
-0.137 |
16 |
C21 |
C |
C14 |
N |
N |
N |
0 |
2.026 |
2.303 |
-1.273 |
17 |
C22 |
C |
C15 |
N |
N |
N |
0 |
2.566 |
3.735 |
-1.252 |
18 |
C24 |
C |
C16 |
N |
N |
N |
0 |
4.0 |
3.942 |
-0.762 |
19 |
C25 |
C |
C17 |
N |
N |
N |
0 |
3.67 |
4.089 |
-2.25 |
20 |
C26 |
C |
C18 |
N |
Y |
N |
0 |
1.633 |
-0.097 |
0.276 |
21 |
C27 |
C |
C19 |
N |
Y |
N |
0 |
2.463 |
-0.144 |
1.375 |
22 |
C31 |
C |
C20 |
N |
Y |
N |
0 |
-0.614 |
1.715 |
1.913 |
23 |
C35 |
C |
C21 |
N |
Y |
N |
0 |
-2.6 |
-0.201 |
1.73 |
24 |
C36 |
C |
C22 |
N |
Y |
N |
0 |
-1.588 |
-0.162 |
0.789 |
25 |
O4 |
O |
O2 |
N |
N |
N |
0 |
5.017 |
-3.564 |
-0.708 |
26 |
N10 |
N |
N2 |
N |
N |
N |
0 |
0.029 |
0.333 |
-1.429 |
27 |
CL1 |
CL |
CL1 |
N |
N |
N |
0 |
-6.115 |
-2.064 |
-1.186 |
28 |
O23 |
O |
O4 |
N |
N |
N |
0 |
1.609 |
4.749 |
-0.939 |
29 |
C17 |
C |
C23 |
N |
Y |
N |
0 |
-3.732 |
-1.594 |
-2.394 |
30 |
O20 |
O |
O3 |
N |
N |
N |
0 |
1.01 |
2.162 |
-0.278 |
31 |
F28 |
F |
F1 |
N |
N |
N |
0 |
2.344 |
0.782 |
2.352 |
32 |
C29 |
C |
C24 |
N |
Y |
N |
0 |
3.416 |
-1.145 |
1.48 |
33 |
C30 |
C |
C25 |
N |
Y |
N |
0 |
-0.593 |
0.793 |
0.883 |
34 |
C32 |
C |
C26 |
N |
Y |
N |
0 |
-1.628 |
1.68 |
2.851 |
35 |
C33 |
C |
C27 |
N |
Y |
N |
0 |
-2.622 |
0.721 |
2.76 |
36 |
CL2 |
CL |
CL2 |
N |
N |
N |
0 |
-3.896 |
0.677 |
3.938 |
37 |
H38 |
H |
H1 |
N |
N |
N |
0 |
5.452 |
-2.345 |
2.388 |
38 |
H37 |
H |
H2 |
N |
N |
N |
0 |
6.535 |
-3.426 |
1.478 |
39 |
H42 |
H |
H4 |
N |
N |
N |
0 |
3.658 |
-4.082 |
2.316 |
40 |
H39 |
H |
H3 |
N |
N |
N |
0 |
6.208 |
-1.783 |
0.877 |
41 |
H41 |
H |
H5 |
N |
N |
N |
0 |
3.135 |
-4.758 |
0.754 |
42 |
H40 |
H |
H6 |
N |
N |
N |
0 |
4.741 |
-5.163 |
1.406 |
43 |
H44 |
H |
H7 |
N |
N |
N |
0 |
2.818 |
-2.795 |
-1.403 |
44 |
H45 |
H |
H8 |
N |
N |
N |
0 |
-0.822 |
0.847 |
-3.276 |
45 |
H46 |
H |
H9 |
N |
N |
N |
0 |
-1.176 |
1.972 |
-1.942 |
46 |
H47 |
H |
H10 |
N |
N |
N |
0 |
-2.979 |
1.573 |
-0.432 |
47 |
H48 |
H |
H11 |
N |
N |
N |
0 |
-5.094 |
0.344 |
0.011 |
48 |
H51 |
H |
H12 |
N |
N |
N |
0 |
1.605 |
2.089 |
-2.255 |
49 |
H50 |
H |
H13 |
N |
N |
N |
0 |
2.838 |
1.606 |
-1.066 |
50 |
H54 |
H |
H14 |
N |
N |
N |
0 |
4.215 |
4.852 |
-0.202 |
51 |
H53 |
H |
H15 |
N |
N |
N |
0 |
4.56 |
3.058 |
-0.456 |
52 |
H55 |
H |
H16 |
N |
N |
N |
0 |
4.012 |
3.302 |
-2.922 |
53 |
H56 |
H |
H17 |
N |
N |
N |
0 |
3.667 |
5.095 |
-2.667 |
54 |
H58 |
H |
H18 |
N |
N |
N |
0 |
0.164 |
2.461 |
1.986 |
55 |
H60 |
H |
H19 |
N |
N |
N |
0 |
-3.377 |
-0.947 |
1.656 |
56 |
H61 |
H |
H20 |
N |
N |
N |
0 |
-1.575 |
-0.877 |
-0.021 |
57 |
H43 |
H |
H21 |
N |
N |
N |
0 |
4.309 |
-3.91 |
-1.269 |
58 |
H57 |
H |
H24 |
N |
N |
N |
0 |
4.067 |
-1.182 |
2.341 |
59 |
H49 |
H |
H22 |
N |
N |
N |
0 |
-3.925 |
-2.492 |
-2.962 |
60 |
H52 |
H |
H23 |
N |
N |
N |
0 |
0.936 |
4.472 |
-0.303 |
61 |
H59 |
H |
H25 |
N |
N |
N |
0 |
-1.645 |
2.4 |
3.656 |
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