Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : UFT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OP3 O OP3 N N Y 0 4.622 -2.05 -1.261
2 P P P N N N 0 4.266 -1.014 -0.082
3 OP1 O OP1 N N N 0 4.116 -1.75 1.194
4 OP2 O OP2 N N N 0 5.45 0.068 0.058
5 O5' O O5' N N N 0 2.888 -0.258 -0.43
6 N1 N N1 N N N 0 -2.364 -0.139 -0.132
7 C6 C C6 N N N 0 -2.32 -0.86 1.031
8 C2 C C2 N N N 0 -3.401 -0.269 -0.979
9 O2 O O2 N N N 0 -3.422 0.385 -2.004
10 N3 N N3 N N N 0 -4.415 -1.112 -0.709
11 C4 C C4 N N N 0 -4.406 -1.843 0.424
12 O4 O O4 N N N 0 -5.323 -2.606 0.67
13 C5 C C5 N N N 0 -3.326 -1.709 1.33
14 F2' F F2' N N N 0 -1.867 3.074 0.073
15 C2' C C2' R N N 0 -1.226 1.937 0.577
16 C5' C C5' N N N 0 2.249 0.65 0.47
17 C4' C C4' R N N 0 0.967 1.186 -0.17
18 O4' O O4' N N N 0 0.001 0.124 -0.328
19 C1' C C1' R N N 0 -1.276 0.787 -0.453
20 C3' C C3' R N N 0 0.283 2.206 0.767
21 O3' O O3' N N N 0 0.607 3.542 0.376
22 HOP3 H HOP3 N N Y 0 5.442 -2.543 -1.118
23 HOP2 H HOP2 N N N 0 5.605 0.588 -0.742
24 H6 H H6 N N N 0 -1.484 -0.75 1.706
25 H5 H H5 N N N 0 -3.304 -2.284 2.243
26 H2' H H2' N N N 0 -1.683 1.628 1.517
27 H5' H H5' N N N 0 2.002 0.13 1.396
28 H5'A H H5'A N N N 0 2.922 1.48 0.688
29 H4' H H4' N N N 0 1.189 1.644 -1.134
30 H1' H H1' N N N 0 -1.402 1.185 -1.46
31 H3' H H3' N N N 0 0.575 2.029 1.802
32 HO3' H HO3' N N Y 0 0.157 4.223 0.894
33 HN3 H HN3 N N N 0 -5.155 -1.193 -1.331