Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : UQ5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 88


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 6.932 0.326 1.751
2 C2 C C2 N N N 0 7.496 1.618 1.306
3 C3 C C3 N N N 0 7.659 1.895 -0.134
4 C4 C C4 N N N 0 7.302 0.96 -1.045
5 C5 C C5 N N N 0 6.746 -0.33 -0.595
6 C6 C C6 N N N 0 6.579 -0.599 0.85
7 C1M C C1M N N N 0 6.76 0.046 3.222
8 C3M C C3M N N N 0 7.209 4.086 -0.211
9 C4M C C4M N N N 0 8.472 0.322 -2.842
10 C7 C C7 N N N 0 6.01 -1.917 1.308
11 C8 C C8 N N N 0 4.505 -1.847 1.294
12 C9 C C9 N N N 0 3.812 -2.757 0.657
13 C10 C C10 N N N 0 4.507 -3.961 0.073
14 C11 C C11 N N N 0 2.321 -2.602 0.507
15 C12 C C12 N N N 0 2.009 -1.946 -0.84
16 C13 C C13 N N N 0 0.517 -1.791 -0.99
17 C14 C C14 N N N 0 0.007 -0.62 -1.283
18 C15 C C15 N N N 0 0.914 0.533 -1.627
19 C16 C C16 N N N 0 -1.487 -0.427 -1.276
20 C17 C C17 N N N 0 -1.924 0.13 0.08
21 C18 C C18 N N N 0 -3.418 0.323 0.087
22 C19 C C19 N N N 0 -4.143 -0.206 1.041
23 C20 C C20 N N N 0 -3.49 -1.055 2.101
24 C21 C C21 N N N 0 -5.63 0.035 1.08
25 C22 C C22 N N N 0 -6.353 -1.123 0.389
26 C23 C C23 N N N 0 -7.84 -0.882 0.427
27 C24 C C24 N N N 0 -8.509 -0.739 -0.689
28 C25 C C25 N N N 0 -7.774 -0.646 -2.002
29 C26 C C26 N N N 0 -10.014 -0.666 -0.662
30 C27 C C27 N N N 0 -10.453 0.8 -0.637
31 C28 C C28 N N N 0 -11.958 0.872 -0.609
32 C29 C C29 N N N 0 -12.563 1.584 0.31
33 C30 C C30 N N N 0 -11.759 2.464 1.232
34 C31 C C31 N N N 0 -14.063 1.521 0.446
35 O2 O O2 N N N 0 7.816 2.456 2.126
36 O3 O O3 N N N 0 8.172 3.084 -0.545
37 O4 O O4 N N N 0 7.456 1.209 -2.371
38 O5 O O5 N N N 0 6.425 -1.171 -1.411
39 H1M1 H 1H1M N N N 0 7.666 -0.417 3.612
40 H1M2 H 2H1M N N N 0 6.574 0.982 3.75
41 H1M3 H 3H1M N N N 0 5.916 -0.627 3.367
42 H3M1 H 1H3M N N N 0 6.296 3.917 -0.783
43 H3M2 H 2H3M N N N 0 6.985 4.034 0.854
44 H3M3 H 3H3M N N N 0 7.611 5.07 -0.45
45 H4M1 H 1H4M N N N 0 9.419 0.564 -2.36
46 H4M2 H 2H4M N N N 0 8.196 -0.706 -2.605
47 H4M3 H 3H4M N N N 0 8.577 0.429 -3.922
48 H71 H 1H7 N N N 0 6.343 -2.71 0.637
49 H72 H 2H7 N N N 0 6.355 -2.129 2.32
50 H8 H H8 N N N 0 3.997 -1.045 1.81
51 H101 H 1H10 N N N 0 5.558 -3.949 0.362
52 H102 H 2H10 N N N 0 4.037 -4.87 0.449
53 H103 H 3H10 N N N 0 4.428 -3.934 -1.014
54 H111 H 1H11 N N N 0 1.847 -3.583 0.552
55 H112 H 2H11 N N N 0 1.938 -1.976 1.313
56 H121 H 1H12 N N N 0 2.483 -0.965 -0.884
57 H122 H 2H12 N N N 0 2.392 -2.572 -1.646
58 H13 H H13 N N N 0 -0.131 -2.644 -0.855
59 H151 H 1H15 N N N 0 1.946 0.182 -1.673
60 H152 H 2H15 N N N 0 0.627 0.945 -2.594
61 H153 H 3H15 N N N 0 0.827 1.304 -0.862
62 H161 H 1H16 N N N 0 -1.767 0.273 -2.064
63 H162 H 2H16 N N N 0 -1.978 -1.385 -1.451
64 H171 H 1H17 N N N 0 -1.645 -0.57 0.867
65 H172 H 2H17 N N N 0 -1.433 1.087 0.255
66 H18 H H18 N N N 0 -3.892 0.898 -0.696
67 H201 H 1H20 N N N 0 -2.409 -1.047 1.958
68 H202 H 2H20 N N N 0 -3.729 -0.655 3.086
69 H203 H 3H20 N N N 0 -3.858 -2.078 2.024
70 H211 H 1H21 N N N 0 -5.96 0.103 2.116
71 H212 H 2H21 N N N 0 -5.861 0.967 0.563
72 H221 H 1H22 N N N 0 -6.022 -1.191 -0.648
73 H222 H 2H22 N N N 0 -6.122 -2.055 0.905
74 H253 H 3H25 N N N 0 -8.081 0.258 -2.527
75 H23 H H23 N N N 0 -8.353 -0.828 1.376
76 H251 H 1H25 N N N 0 -6.701 -0.613 -1.816
77 H252 H 2H25 N N N 0 -8.01 -1.518 -2.612
78 H261 H 1H26 N N N 0 -10.418 -1.151 -1.55
79 H262 H 2H26 N N N 0 -10.386 -1.172 0.229
80 H271 H 1H27 N N N 0 -10.05 1.285 0.252
81 H272 H 2H27 N N N 0 -10.082 1.306 -1.528
82 H28 H H28 N N N 0 -12.539 0.338 -1.347
83 H301 H 1H30 N N N 0 -10.697 2.344 1.014
84 H302 H 2H30 N N N 0 -12.045 3.505 1.081
85 H313 H 3H31 N N N 0 -14.483 2.516 0.293
86 H303 H 3H30 N N N 0 -11.952 2.18 2.266
87 H311 H 1H31 N N N 0 -14.467 0.838 -0.301
88 H312 H 2H31 N N N 0 -14.323 1.166 1.443