Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : URW

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 63


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 F1 F F1 N N N 0 6.591 -3.281 0.089
2 C25 C C1 N N N 0 5.207 -3.112 -0.029
3 F F F2 N N N 0 4.605 -3.311 1.218
4 O4 O O1 N N N 0 4.926 -1.788 -0.488
5 C20 C C2 N Y N 0 5.354 -0.761 0.292
6 C18 C C3 N Y N 0 5.947 -1.021 1.519
7 C16 C C4 N Y N 0 6.382 0.025 2.31
8 C19 C C5 N Y N 0 5.203 0.549 -0.139
9 C17 C C6 N Y N 0 5.639 1.591 0.655
10 C15 C C7 N Y N 0 6.225 1.33 1.88
11 C14 C C8 N N N 0 4.564 0.834 -1.474
12 N4 N N1 N N N 0 3.107 0.851 -1.324
13 C21 C C9 R N N 0 2.411 2.116 -1.077
14 C23 C C10 N N N 0 1.892 2.136 0.338
15 N5 N N2 N N N 0 0.899 2.98 0.68
16 C24 C C11 N N N 0 0.394 2.999 2.055
17 O3 O O2 N N N 0 2.369 1.392 1.169
18 C22 C C12 N N N 0 3.382 3.281 -1.281
19 C13 C C13 N N N 0 2.406 -0.297 -1.414
20 O2 O O3 N N N 0 2.972 -1.333 -1.706
21 C11 C C14 N Y N 0 0.956 -0.297 -1.159
22 N2 N N3 N Y N 0 0.156 0.801 -0.969
23 C12 C C15 N Y N 0 0.132 -1.402 -1.069
24 N3 N N4 N Y N 0 -1.101 -0.974 -0.83
25 C10 C C16 N Y N 0 -1.108 0.342 -0.767
26 C9 C C17 N N N 0 -2.297 1.183 -0.519
27 O1 O O4 N N N 0 -2.189 2.392 -0.484
28 N N N5 N Y N 0 -3.502 0.608 -0.333
29 C6 C C18 N Y N 0 -4.657 1.289 -0.104
30 C1 C C19 N Y N 0 -5.677 0.375 0.037
31 C7 C C20 N Y N 0 -3.732 -0.736 -0.353
32 C3 C C21 N Y N 0 -5.055 -0.958 -0.126
33 C5 C C22 N Y N 0 -5.904 -2.141 -0.026
34 C4 C C23 N Y N 0 -7.226 -1.986 0.211
35 C2 C C24 N Y N 0 -7.807 -0.707 0.363
36 C C C25 N Y N 0 -7.061 0.45 0.281
37 C8 C C26 N N N 0 -9.255 -0.606 0.619
38 O O O5 N N N 0 -9.775 0.486 0.754
39 N1 N N6 N N N 0 -10.004 -1.724 0.705
40 H1 H H1 N N N 0 4.812 -3.836 -0.743
41 H2 H H2 N N N 0 6.069 -2.04 1.856
42 H3 H H3 N N N 0 6.844 -0.176 3.265
43 H4 H H4 N N N 0 5.522 2.611 0.32
44 H5 H H5 N N N 0 6.566 2.146 2.5
45 H6 H H6 N N N 0 4.903 1.803 -1.839
46 H7 H H7 N N N 0 4.847 0.058 -2.185
47 H8 H H8 N N N 0 1.576 2.213 -1.771
48 H9 H H9 N N N 0 0.517 3.575 0.015
49 H10 H H10 N N N 0 -0.401 3.739 2.14
50 H11 H H11 N N N 0 0.004 2.015 2.313
51 H12 H H12 N N N 0 1.206 3.258 2.736
52 H13 H H13 N N N 0 3.692 3.317 -2.325
53 H14 H H14 N N N 0 2.888 4.216 -1.016
54 H15 H H15 N N N 0 4.257 3.139 -0.646
55 H16 H H16 N N N 0 0.438 1.729 -0.977
56 H17 H H17 N N N 0 0.438 -2.432 -1.174
57 H19 H H19 N N N 0 -4.756 2.362 -0.042
58 H20 H H20 N N N 0 -2.986 -1.499 -0.52
59 H21 H H21 N N N 0 -5.482 -3.129 -0.14
60 H22 H H22 N N N 0 -7.854 -2.861 0.285
61 H23 H H23 N N N 0 -7.537 1.411 0.403
62 H24 H H24 N N N 0 -9.59 -2.594 0.597
63 H25 H H25 N N N 0 -10.957 -1.657 0.873