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PDBeChem : Atoms of Molecule
Molecule : UWJ
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 40
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C2 |
C |
C1 |
N |
N |
N |
0 |
-1.644 |
-0.88 |
0.697 |
2 |
C6 |
C |
C2 |
N |
N |
N |
0 |
-2.576 |
-1.479 |
-1.383 |
3 |
OP2 |
O |
O1 |
N |
N |
N |
0 |
4.666 |
-1.295 |
1.617 |
4 |
P |
P |
P1 |
N |
N |
N |
0 |
4.952 |
-0.881 |
0.225 |
5 |
OP1 |
O |
O2 |
N |
N |
N |
0 |
5.593 |
-2.118 |
-0.582 |
6 |
O5' |
O |
O3 |
N |
N |
N |
0 |
3.584 |
-0.424 |
-0.491 |
7 |
C5' |
C |
C3 |
N |
N |
N |
0 |
2.724 |
0.582 |
0.046 |
8 |
C4' |
C |
C4 |
R |
N |
N |
0 |
1.519 |
0.77 |
-0.879 |
9 |
O4' |
O |
O4 |
N |
N |
N |
0 |
0.694 |
-0.415 |
-0.885 |
10 |
C3' |
C |
C5 |
R |
N |
N |
0 |
0.573 |
1.867 |
-0.329 |
11 |
O3' |
O |
O5 |
N |
N |
N |
0 |
0.986 |
3.163 |
-0.767 |
12 |
C2' |
C |
C6 |
S |
N |
N |
0 |
-0.783 |
1.475 |
-0.964 |
13 |
SE2 |
SE |
SE1 |
N |
N |
N |
0 |
-2.238 |
1.705 |
0.329 |
14 |
CA' |
C |
C7 |
N |
N |
N |
0 |
-2.125 |
3.63 |
0.681 |
15 |
C1' |
C |
C8 |
R |
N |
N |
0 |
-0.614 |
-0.013 |
-1.327 |
16 |
N1 |
N |
N1 |
N |
N |
N |
0 |
-1.637 |
-0.811 |
-0.646 |
17 |
O2 |
O |
O6 |
N |
N |
N |
0 |
-0.802 |
-0.274 |
1.333 |
18 |
C5 |
C |
C9 |
N |
N |
N |
0 |
-3.52 |
-2.214 |
-0.756 |
19 |
C7 |
C |
C10 |
N |
N |
N |
0 |
-4.563 |
-2.956 |
-1.551 |
20 |
C4 |
C |
C11 |
N |
N |
N |
0 |
-3.512 |
-2.282 |
0.658 |
21 |
N3 |
N |
N2 |
N |
N |
N |
0 |
-2.572 |
-1.605 |
1.348 |
22 |
O4 |
O |
O7 |
N |
N |
N |
0 |
-4.352 |
-2.939 |
1.246 |
23 |
O1 |
O |
O8 |
N |
N |
Y |
0 |
5.99 |
0.35 |
0.234 |
24 |
H6 |
H |
H1 |
N |
N |
N |
0 |
-2.567 |
-1.415 |
-2.461 |
25 |
H1 |
H |
H2 |
N |
N |
N |
0 |
6.422 |
-2.446 |
-0.206 |
26 |
H5'1 |
H |
H3 |
N |
N |
N |
0 |
2.379 |
0.278 |
1.034 |
27 |
H5'2 |
H |
H4 |
N |
N |
N |
0 |
3.27 |
1.522 |
0.125 |
28 |
H4' |
H |
H5 |
N |
N |
N |
0 |
1.847 |
1.014 |
-1.89 |
29 |
H3' |
H |
H6 |
N |
N |
N |
0 |
0.521 |
1.825 |
0.759 |
30 |
HO3' |
H |
H7 |
N |
N |
N |
0 |
1.87 |
3.416 |
-0.468 |
31 |
H2' |
H |
H8 |
N |
N |
N |
0 |
-0.971 |
2.069 |
-1.858 |
32 |
HA'1 |
H |
H9 |
N |
N |
N |
0 |
-2.893 |
3.913 |
1.401 |
33 |
HA'3 |
H |
H10 |
N |
N |
N |
0 |
-1.142 |
3.868 |
1.086 |
34 |
HA'2 |
H |
H11 |
N |
N |
N |
0 |
-2.278 |
4.179 |
-0.249 |
35 |
H1' |
H |
H12 |
N |
N |
N |
0 |
-0.697 |
-0.146 |
-2.405 |
36 |
H72 |
H |
H13 |
N |
N |
N |
0 |
-4.199 |
-3.958 |
-1.781 |
37 |
H2 |
H |
H14 |
N |
N |
N |
0 |
-5.481 |
-3.029 |
-0.967 |
38 |
H71 |
H |
H15 |
N |
N |
N |
0 |
-4.763 |
-2.42 |
-2.478 |
39 |
H3 |
H |
H16 |
N |
N |
N |
0 |
-2.565 |
-1.641 |
2.318 |
40 |
H4 |
H |
H17 |
N |
N |
N |
0 |
6.223 |
0.674 |
-0.647 |
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