Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : V18

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -3.658 -0.167 -0.289
2 C14 C C2 N Y N 0 4.226 0.247 0.434
3 C5 C C3 N N N 0 -4.825 0.251 0.607
4 C8 C C7 N N N 0 -5.421 1.621 0.244
5 C6 C C4 N N N 0 -6.173 -0.359 0.188
6 C11 C C5 N Y N 0 2.031 -0.761 0.169
7 C7 C C6 N N N 0 -6.803 1.004 0.517
8 C9 C C8 N N N 0 -2.728 -1.21 0.357
9 C10 C C9 N N N 0 -0.323 -0.33 0.597
10 C12 C C10 N Y N 0 2.559 -1.907 0.697
11 C13 C C11 N Y N 0 4.663 -0.976 0.968
12 N1 N N1 N N N 0 -1.094 -0.875 -1.556
13 N2 N N2 N N N 0 0.688 -0.704 -0.218
14 C3 C C12 N N N 0 -2.468 0.81 -0.247
15 N3 N N3 N Y N 0 3.827 -1.982 1.075
16 O1 O O1 N N N 0 0.964 -1.377 -2.352
17 C1 C C13 N N N 0 0.243 -1.013 -1.444
18 C2 C C14 N N N 0 -1.566 -0.423 -0.247
19 C15 C C15 N Y N 0 5.083 1.35 0.3
20 O2 O O2 N N N 0 -0.245 0.007 1.759
21 C16 C C16 N Y N 0 4.602 2.514 -0.22
22 C17 C C17 N Y N 0 3.273 2.628 -0.622
23 C18 C C18 N Y N 0 2.413 1.576 -0.507
24 C19 C C19 N Y N 0 2.872 0.364 0.023
25 H1 H H1 N N N 0 -3.973 -0.428 -1.299
26 H2 H H2 N N N 0 -4.605 0.138 1.669
27 H3 H H3 N N N 0 -6.224 -0.62 -0.869
28 H4 H H4 N N N 0 -6.51 -1.165 0.84
29 H5 H H5 N N N 0 -7.568 1.315 -0.194
30 H6 H H6 N N N 0 -7.125 1.097 1.554
31 H7 H H7 N N N 0 -5.151 2.414 0.941
32 H8 H H8 N N N 0 -5.267 1.902 -0.798
33 H9 H H9 N N N 0 -2.745 -1.197 1.447
34 H10 H H10 N N N 0 -2.84 -2.212 -0.058
35 H11 H H11 N N N 0 1.924 -2.773 0.813
36 H12 H H12 N N N 0 5.687 -1.089 1.291
37 H13 H H13 N N N 0 -1.633 -1.041 -2.345
38 H14 H H14 N N N 0 -2.373 1.422 -1.144
39 H15 H H15 N N N 0 -2.414 1.394 0.672
40 H16 H H16 N N N 0 6.115 1.277 0.608
41 H17 H H17 N N N 0 5.263 3.363 -0.322
42 H18 H H18 N N N 0 2.919 3.562 -1.03
43 H19 H H19 N N N 0 1.385 1.678 -0.822