Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : V1T

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C01 N N N 0 -2.941 2.155 -0.002
2 N05 N N05 N N N 0 -2.133 0.932 -0.003
3 C06 C C06 N Y N 0 -0.746 0.877 -0.002
4 C07 C C07 N Y N 0 0.244 1.852 0.0
5 C09 C C09 N Y N 0 1.572 1.487 0.001
6 C11 C C11 N Y N 0 1.928 0.134 0.001
7 C12 C C12 N Y N 0 0.936 -0.848 -0.001
8 C14 C C14 N Y N 0 -0.396 -0.478 -0.002
9 N15 N N15 N N N 0 -1.587 -1.2 -0.003
10 C16 C C16 N N N 0 -1.706 -2.661 -0.003
11 C20 C C20 N N N 0 -2.611 -0.326 0.002
12 O21 O O21 N N N 0 -3.79 -0.627 0.007
13 C22 C C22 N N N 0 3.352 -0.254 0.001
14 N23 N N23 N N N 0 4.31 0.695 0.002
15 O26 O O26 N N N 0 3.662 -1.43 0.0
16 H011 H H011 N N N 0 -3.14 2.459 -1.03
17 H012 H H012 N N N 0 -3.884 1.967 0.511
18 H013 H H013 N N N 0 -2.399 2.948 0.512
19 H07 H H07 N N N 0 -0.028 2.897 0.0
20 H09 H H09 N N N 0 2.339 2.246 0.002
21 H12 H H12 N N N 0 1.209 -1.893 -0.001
22 H161 H H161 N N N 0 -1.736 -3.023 1.025
23 H162 H H162 N N N 0 -2.622 -2.951 -0.517
24 H163 H H163 N N N 0 -0.848 -3.095 -0.516
25 H231 H H231 N N N 0 4.063 1.633 0.002
26 H232 H H232 N N N 0 5.245 0.44 0.002