Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : V3W

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 N N N 0 5.101 -0.984 0.402
2 C02 C C2 N Y N 0 3.783 -0.343 0.249
3 C03 C C3 N Y N 0 3.387 0.663 1.135
4 C04 C C4 N Y N 0 2.154 1.261 0.991
5 C05 C C5 N Y N 0 1.301 0.864 -0.04
6 C06 C C6 N N N 0 -0.023 1.509 -0.194
7 C08 C C7 N N N 0 -1.013 -0.703 -0.543
8 C09 C C8 N N N 0 -2.091 -1.296 0.37
9 C10 C C9 N N N 0 -3.458 -0.738 -0.033
10 C12 C C10 N N N 0 -5.743 -1.437 0.158
11 C13 C C11 N N N 0 -3.461 0.783 0.141
12 C14 C C12 N N N 0 -2.398 1.4 -0.774
13 C16 C C13 N Y N 0 1.696 -0.139 -0.926
14 C17 C C14 N Y N 0 2.93 -0.736 -0.787
15 N07 N N1 N N N 0 -1.105 0.763 -0.493
16 O11 O O1 N N N 0 -4.47 -1.313 0.796
17 O15 O O2 N N N 0 -0.134 2.711 -0.051
18 H1 H H1 N N N 0 5.76 -0.68 1.202
19 H4 H H4 N N N 0 4.046 0.969 1.934
20 H5 H H5 N N N 0 1.848 2.038 1.676
21 H6 H H6 N N N 0 -0.028 -1.019 -0.198
22 H7 H H7 N N N 0 -1.17 -1.046 -1.565
23 H8 H H8 N N N 0 -2.097 -2.381 0.269
24 H9 H H9 N N N 0 -1.879 -1.028 1.405
25 H10 H H10 N N N 0 -3.658 -0.984 -1.075
26 H11 H H11 N N N 0 -5.648 -2.072 -0.723
27 H12 H H12 N N N 0 -6.456 -1.882 0.852
28 H13 H H13 N N N 0 -6.096 -0.45 -0.143
29 H14 H H14 N N N 0 -4.442 1.177 -0.124
30 H15 H H15 N N N 0 -3.237 1.031 1.178
31 H16 H H16 N N N 0 -2.67 1.23 -1.816
32 H17 H H17 N N N 0 -2.33 2.471 -0.585
33 H18 H H18 N N N 0 1.035 -0.445 -1.723
34 H19 H H19 N N N 0 3.236 -1.51 -1.475
35 O1 O O3 N N Y 0 5.444 -1.856 -0.368