Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : V4V

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 50


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C02 C C1 N Y N 0 -7.285 0.758 1.142
2 C03 C C2 N Y N 0 -7.463 1.859 0.292
3 C04 C C3 N Y N 0 -6.539 2.129 -0.672
4 C05 C C4 N Y N 0 -5.42 1.278 -0.781
5 C06 C C5 N Y N 0 -4.429 1.499 -1.751
6 C07 C C6 N Y N 0 -3.362 0.656 -1.826
7 C08 C C7 N Y N 0 -3.239 -0.422 -0.953
8 C09 C C8 N N N 0 -2.045 -1.334 -1.065
9 C11 C C9 N Y N 0 0.165 -1.557 -0.217
10 C12 C C10 N Y N 0 0.287 -2.701 -0.992
11 C13 C C11 N Y N 0 1.464 -3.424 -0.975
12 C14 C C12 N Y N 0 2.521 -3.007 -0.187
13 C15 C C13 N Y N 0 2.402 -1.867 0.586
14 C16 C C14 N N N 0 3.556 -1.416 1.445
15 C18 C C15 N N N 0 5.552 -0.046 1.48
16 C19 C C16 N Y N 0 6.407 0.883 0.657
17 C20 C C17 N Y N 0 6.213 2.249 0.745
18 C21 C C18 N Y N 0 7.006 3.094 -0.016
19 C22 C C19 N Y N 0 7.968 2.531 -0.841
20 C23 C C20 N Y N 0 8.105 1.157 -0.876
21 C25 C C21 N Y N 0 1.229 -1.138 0.569
22 C26 C C22 N Y N 0 -4.181 -0.665 -0.001
23 C27 C C23 N Y N 0 -5.297 0.183 0.108
24 N01 N N1 N N N 0 -8.235 0.496 2.118
25 N17 N N2 N N N 0 4.414 -0.507 0.673
26 N24 N N3 N Y N 0 7.336 0.383 -0.135
27 N28 N N4 N Y N 0 -6.24 -0.036 1.031
28 O10 O O1 N N N 0 -0.992 -0.844 -0.232
29 H1 H H1 N N N 0 -8.332 2.491 0.401
30 H2 H H2 N N N 0 -6.66 2.972 -1.335
31 H3 H H3 N N N 0 -4.514 2.331 -2.433
32 H4 H H4 N N N 0 -2.6 0.827 -2.573
33 H5 H H5 N N N 0 -2.323 -2.339 -0.744
34 H6 H H6 N N N 0 -1.706 -1.364 -2.1
35 H7 H H7 N N N 0 -0.539 -3.028 -1.607
36 H8 H H8 N N N 0 1.559 -4.315 -1.577
37 H9 H H9 N N N 0 3.441 -3.573 -0.175
38 H10 H H10 N N N 0 3.174 -0.897 2.323
39 H11 H H11 N N N 0 4.136 -2.284 1.759
40 H12 H H12 N N N 0 6.146 -0.904 1.794
41 H13 H H13 N N N 0 5.183 0.483 2.359
42 H14 H H14 N N N 0 5.453 2.652 1.398
43 H15 H H15 N N N 0 6.876 4.165 0.032
44 H16 H H16 N N N 0 8.601 3.16 -1.451
45 H17 H H17 N N N 0 8.852 0.711 -1.516
46 H18 H H18 N N N 0 1.138 -0.245 1.169
47 H19 H H19 N N N 0 -4.071 -1.505 0.668
48 H20 H H20 N N N 0 -9.011 1.071 2.207
49 H21 H H21 N N N 0 -8.123 -0.263 2.713
50 H22 H H22 N N N 0 3.884 0.274 0.316