Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VCW

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 38


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -2.046 -0.067 -0.666
2 C5 C C2 R N N 0 -3.152 0.061 0.383
3 C6 C C3 N N N 0 -4.008 1.291 0.074
4 C7 C C4 R N N 0 0.607 -2.667 -0.903
5 C8 C C5 S N N 0 1.212 -2.573 0.501
6 C1 C C6 N N N 0 2.34 1.092 0.169
7 C2 C C7 S N N 0 1.387 -0.105 0.172
8 C3 C C8 S N N 0 -0.104 -1.352 -1.234
9 C9 C C9 S N N 0 2.158 -1.37 0.558
10 O1 O O1 N N N 0 0.555 2.91 0.959
11 S1 S S1 N N N 0 1.401 2.612 -0.143
12 O2 O O2 N N N 0 2.447 3.717 -0.123
13 O3 O O3 N N N 0 0.902 2.626 -1.474
14 O4 O O4 N N N 0 0.825 -0.271 -1.133
15 O5 O O5 N N N 0 -1.178 -1.145 -0.314
16 O6 O O6 N N N 0 -3.972 -1.109 0.356
17 O7 O O7 N N N 0 -4.967 1.478 1.117
18 O8 O O8 N N N 0 -0.333 -3.742 -0.947
19 O9 O O9 N N N 0 1.94 -3.769 0.789
20 O10 O O10 N N N 0 2.672 -1.23 1.884
21 H1 H H1 N N N 0 -2.492 -0.263 -1.642
22 H2 H H2 N N N 0 -1.475 0.861 -0.708
23 H3 H H3 N N N 0 -2.705 0.169 1.371
24 H4 H H4 N N N 0 -3.369 2.171 0.007
25 H5 H H5 N N N 0 -4.526 1.145 -0.874
26 H6 H H6 N N N 0 1.399 -2.845 -1.63
27 H7 H H7 N N N 0 0.414 -2.447 1.234
28 H8 H H8 N N N 0 2.837 1.164 1.136
29 H9 H H9 N N N 0 3.087 0.959 -0.614
30 H10 H H10 N N N 0 0.589 0.068 0.894
31 H11 H H11 N N N 0 -0.499 -1.397 -2.249
32 H12 H H12 N N N 0 2.983 -1.521 -0.139
33 H13 H H13 N N N 0 -4.403 -1.267 -0.495
34 H14 H H14 N N N 0 -5.546 2.242 0.987
35 H15 H H15 N N N 0 -0.758 -3.858 -1.809
36 H16 H H16 N N N 0 1.402 -4.572 0.763
37 H17 H H17 N N N 0 3.173 -1.997 2.195
38 H18 H H18 N N N 0 2.089 4.601 -0.278