Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VI5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 24


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -0.537 -1.102 0.363
2 C7 C C1 N Y N 0 2.58 0.834 0.096
3 C8 C C2 N Y N 0 1.243 0.527 0.281
4 C1 C C3 N N N 0 -2.938 -0.513 0.29
5 C5 C C4 N Y N 0 3.061 -1.483 -0.297
6 C6 C C5 N Y N 0 3.487 -0.172 -0.193
7 C4 C C6 N Y N 0 1.728 -1.794 -0.113
8 C3 C C7 N Y N 0 0.814 -0.789 0.176
9 C2 C C8 N N N 0 -1.49 -0.227 -0.015
10 F F F1 N N N 0 2.999 2.114 0.192
11 O O O1 N N N 0 -1.182 0.789 -0.6
12 N N N2 N N N 0 -3.771 0.584 -0.221
13 C C C9 N N N 0 -5.193 0.339 0.058
14 H1 H H1 N N N 0 -0.787 -1.95 0.761
15 H2 H H2 N N N 0 0.535 1.311 0.507
16 H3 H H3 N N N 0 -3.233 -1.447 -0.189
17 H4 H H4 N N N 0 -3.072 -0.599 1.368
18 H5 H H5 N N N 0 3.771 -2.265 -0.523
19 H6 H H6 N N N 0 4.53 0.069 -0.337
20 H7 H H7 N N N 0 1.396 -2.818 -0.196
21 H8 H H8 N N N 0 -3.616 0.726 -1.208
22 H10 H H10 N N N 0 -5.503 -0.589 -0.422
23 H11 H H11 N N N 0 -5.343 0.259 1.135
24 H12 H H12 N N N 0 -5.787 1.166 -0.331