Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VI8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 29


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 -4.795 -0.604 -1.173
2 C7 C C1 N Y N 0 -3.004 0.337 0.019
3 C8 C C2 N Y N 0 -3.618 0.006 1.217
4 C9 C C3 N Y N 0 -4.844 -0.642 1.174
5 O1 O O1 N N N 0 5.464 -0.644 0.004
6 C1 C C4 N Y N 0 3.384 1.307 -0.002
7 C5 C C5 N Y N 0 1.044 1.819 0.001
8 C6 C C6 N N N 0 -1.672 1.04 0.014
9 C4 C C7 N Y N 0 0.739 0.462 -0.001
10 C3 C C8 N Y N 0 1.758 -0.478 -0.009
11 C2 C C9 N Y N 0 3.088 -0.057 -0.004
12 C12 C C10 N N N 0 4.18 -1.052 -0.001
13 O O O2 N N N 0 3.921 -2.239 -0.003
14 C C C11 N Y N 0 2.362 2.235 0.001
15 N N N2 N N N 0 -0.595 0.047 0.005
16 C11 C C12 N Y N 0 -3.629 0.012 -1.17
17 C10 C C13 N Y N 0 -5.408 -0.934 -0.053
18 H1 H H1 N N N 0 -3.154 0.246 2.162
19 H2 H H2 N N N 0 -5.351 -0.915 2.088
20 H3 H H3 N N N 0 6.143 -1.332 0.005
21 H4 H H4 N N N 0 4.413 1.637 0.003
22 H5 H H5 N N N 0 0.249 2.549 0.007
23 H6 H H6 N N N 0 -1.595 1.667 -0.875
24 H7 H H7 N N N 0 -1.585 1.662 0.905
25 H8 H H8 N N N 0 1.523 -1.532 -0.01
26 H9 H H9 N N N 0 2.593 3.29 0.002
27 H10 H H10 N N N 0 -0.808 -0.9 0.004
28 H11 H H11 N N N 0 -3.158 0.267 -2.108
29 H12 H H12 N N N 0 -6.362 -1.439 -0.096