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PDBeChem : Atoms of Molecule
Molecule : VK1
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 43
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C10 |
C |
C1 |
R |
N |
N |
0 |
3.31 |
0.59 |
-0.486 |
2 |
C15 |
C |
C2 |
N |
N |
N |
0 |
1.713 |
2.201 |
0.356 |
3 |
C17 |
C |
C3 |
N |
Y |
N |
0 |
0.532 |
-2.127 |
0.014 |
4 |
C03 |
C |
C4 |
N |
N |
N |
0 |
-2.73 |
-0.442 |
-0.334 |
5 |
C04 |
C |
C5 |
N |
N |
N |
0 |
-3.652 |
-1.63 |
-0.052 |
6 |
C05 |
C |
C6 |
N |
N |
N |
0 |
-3.509 |
-1.094 |
-1.478 |
7 |
C06 |
C |
C7 |
N |
Y |
N |
0 |
-1.244 |
-0.685 |
-0.276 |
8 |
C07 |
C |
C8 |
N |
Y |
N |
0 |
-0.358 |
0.357 |
-0.47 |
9 |
C08 |
C |
C9 |
N |
Y |
N |
0 |
1.011 |
0.088 |
-0.408 |
10 |
C11 |
C |
C10 |
N |
N |
N |
0 |
3.54 |
0.04 |
0.923 |
11 |
C12 |
C |
C11 |
N |
N |
N |
0 |
4.296 |
1.729 |
-0.758 |
12 |
C14 |
C |
C12 |
N |
N |
N |
0 |
2.716 |
3.323 |
0.075 |
13 |
C19 |
C |
C13 |
N |
N |
N |
0 |
2.895 |
-3.482 |
0.279 |
14 |
N01 |
N |
N1 |
N |
N |
N |
0 |
-2.392 |
1.611 |
1.562 |
15 |
N09 |
N |
N2 |
N |
N |
N |
0 |
1.936 |
1.102 |
-0.595 |
16 |
N16 |
N |
N3 |
N |
Y |
N |
0 |
1.414 |
-1.155 |
-0.166 |
17 |
N20 |
N |
N4 |
N |
Y |
N |
0 |
-0.773 |
-1.901 |
-0.039 |
18 |
N21 |
N |
N5 |
N |
N |
N |
0 |
-4.716 |
1.101 |
0.614 |
19 |
O13 |
O |
O1 |
N |
N |
N |
0 |
4.044 |
2.8 |
0.155 |
20 |
O22 |
O |
O2 |
N |
N |
N |
0 |
-3.141 |
2.228 |
-0.74 |
21 |
S02 |
S |
S1 |
R |
N |
N |
0 |
-3.277 |
1.195 |
0.226 |
22 |
S18 |
S |
S2 |
N |
N |
N |
0 |
1.107 |
-3.763 |
0.325 |
23 |
H1 |
H |
H1 |
N |
N |
N |
0 |
3.461 |
-0.205 |
-1.217 |
24 |
H2 |
H |
H2 |
N |
N |
N |
0 |
1.851 |
1.835 |
1.373 |
25 |
H3 |
H |
H3 |
N |
N |
N |
0 |
0.698 |
2.582 |
0.241 |
26 |
H4 |
H |
H4 |
N |
N |
N |
0 |
-3.183 |
-2.588 |
0.175 |
27 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-4.587 |
-1.429 |
0.47 |
28 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-4.35 |
-0.54 |
-1.894 |
29 |
H7 |
H |
H7 |
N |
N |
N |
0 |
-2.946 |
-1.699 |
-2.189 |
30 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-0.716 |
1.357 |
-0.665 |
31 |
H9 |
H |
H9 |
N |
N |
N |
0 |
2.834 |
-0.767 |
1.117 |
32 |
H10 |
H |
H10 |
N |
N |
N |
0 |
4.558 |
-0.339 |
1.003 |
33 |
H11 |
H |
H11 |
N |
N |
N |
0 |
3.39 |
0.837 |
1.652 |
34 |
H12 |
H |
H12 |
N |
N |
N |
0 |
5.316 |
1.367 |
-0.623 |
35 |
H13 |
H |
H13 |
N |
N |
N |
0 |
4.168 |
2.084 |
-1.781 |
36 |
H14 |
H |
H14 |
N |
N |
N |
0 |
2.542 |
3.725 |
-0.923 |
37 |
H15 |
H |
H15 |
N |
N |
N |
0 |
2.591 |
4.115 |
0.814 |
38 |
H16 |
H |
H16 |
N |
N |
N |
0 |
3.176 |
-3.092 |
-0.699 |
39 |
H17 |
H |
H17 |
N |
N |
N |
0 |
3.169 |
-2.761 |
1.05 |
40 |
H18 |
H |
H18 |
N |
N |
N |
0 |
3.416 |
-4.422 |
0.459 |
41 |
H19 |
H |
H19 |
N |
N |
N |
0 |
-2.452 |
1.076 |
2.369 |
42 |
H20 |
H |
H20 |
N |
N |
N |
0 |
-1.814 |
2.389 |
1.538 |
43 |
H21 |
H |
H21 |
N |
N |
N |
0 |
-4.989 |
1.311 |
1.521 |
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