Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VMN

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 3.695 0.773 0.596
2 C2 C C2 N N N 0 3.208 -0.459 0.993
3 C3 C C3 N N N 0 2.156 -1.039 0.275
4 N4 N N1 N N N 0 1.63 -0.4 -0.786
5 C5 C C4 N N N 0 2.103 0.81 -1.182
6 C6 C C5 N N N 0 3.116 1.408 -0.52
7 O7 O O1 N N N 0 4.709 1.362 1.274
8 O8 O O2 N N N 0 1.715 -2.127 0.612
9 C9 C C6 N N N 0 0.528 -1.021 -1.527
10 C10 C C7 N Y N 0 -0.786 -0.589 -0.929
11 C11 C C8 N Y N 0 -1.418 0.548 -1.397
12 C12 C C9 N Y N 0 -2.623 0.944 -0.849
13 C13 C C10 N Y N 0 -3.197 0.203 0.169
14 C14 C C11 N Y N 0 -2.564 -0.935 0.637
15 C15 C C12 N Y N 0 -1.361 -1.334 0.084
16 CL16 CL CL1 N N N 0 -4.71 0.7 0.858
17 H1 H H1 N N N 0 3.635 -0.967 1.845
18 H2 H H2 N N N 0 1.663 1.301 -2.038
19 H3 H H3 N N N 0 3.482 2.371 -0.845
20 H4 H H4 N N N 0 4.975 2.22 0.917
21 H5 H H5 N N N 0 0.572 -0.71 -2.571
22 H6 H H6 N N N 0 0.616 -2.106 -1.467
23 H7 H H7 N N N 0 -0.97 1.126 -2.191
24 H8 H H8 N N N 0 -3.117 1.832 -1.214
25 H9 H H9 N N N 0 -3.011 -1.514 1.431
26 H10 H H10 N N N 0 -0.869 -2.224 0.446