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PDBeChem : Atoms of Molecule
Molecule : VOI
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 45
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C1 |
C |
C1 |
N |
N |
N |
0 |
-5.39 |
-0.106 |
0.402 |
2 |
C10 |
C |
C2 |
N |
Y |
N |
0 |
1.481 |
-0.52 |
-1.898 |
3 |
C11 |
C |
C3 |
N |
Y |
N |
0 |
0.516 |
0.079 |
-1.102 |
4 |
C12 |
C |
C4 |
N |
Y |
N |
0 |
2.163 |
1.459 |
-0.201 |
5 |
C13 |
C |
C5 |
N |
Y |
N |
0 |
2.596 |
2.658 |
-0.686 |
6 |
C14 |
C |
C6 |
N |
Y |
N |
0 |
3.957 |
3.0 |
-0.581 |
7 |
C15 |
C |
C7 |
N |
Y |
N |
0 |
4.834 |
2.155 |
-0.007 |
8 |
C16 |
C |
C8 |
N |
Y |
N |
0 |
3.095 |
0.577 |
0.401 |
9 |
C17 |
C |
C9 |
N |
Y |
N |
0 |
2.95 |
-0.672 |
0.967 |
10 |
C18 |
C |
C10 |
N |
Y |
N |
0 |
4.228 |
-1.075 |
1.411 |
11 |
C19 |
C |
C11 |
N |
N |
N |
0 |
4.551 |
-2.31 |
2.061 |
12 |
C2 |
C |
C12 |
N |
N |
N |
0 |
-7.737 |
-0.114 |
1.058 |
13 |
C20 |
C |
C13 |
N |
Y |
N |
0 |
5.109 |
-0.058 |
1.1 |
14 |
C3 |
C |
C14 |
N |
N |
N |
0 |
-6.094 |
1.548 |
2.047 |
15 |
C4 |
C |
C15 |
N |
N |
N |
0 |
-3.993 |
0.451 |
0.494 |
16 |
C5 |
C |
C16 |
N |
N |
N |
0 |
-3.07 |
-0.328 |
-0.446 |
17 |
C6 |
C |
C17 |
N |
Y |
N |
0 |
-0.796 |
-0.384 |
-1.137 |
18 |
C7 |
C |
C18 |
N |
Y |
N |
0 |
-1.132 |
-1.442 |
-1.966 |
19 |
C8 |
C |
C19 |
N |
Y |
N |
0 |
-0.165 |
-2.036 |
-2.756 |
20 |
C9 |
C |
C20 |
N |
Y |
N |
0 |
1.138 |
-1.572 |
-2.726 |
21 |
N1 |
N |
N1 |
N |
N |
N |
0 |
-6.378 |
0.427 |
1.147 |
22 |
N2 |
N |
N2 |
N |
Y |
N |
0 |
4.422 |
0.94 |
0.489 |
23 |
N3 |
N |
N3 |
N |
N |
N |
0 |
4.807 |
-3.289 |
2.576 |
24 |
O1 |
O |
O1 |
N |
N |
N |
0 |
-5.626 |
-1.031 |
-0.346 |
25 |
O2 |
O |
O2 |
N |
N |
N |
0 |
-1.745 |
0.2 |
-0.359 |
26 |
O3 |
O |
O3 |
N |
N |
N |
0 |
0.851 |
1.117 |
-0.29 |
27 |
H1 |
H |
H1 |
N |
N |
N |
0 |
2.5 |
-0.162 |
-1.873 |
28 |
H2 |
H |
H2 |
N |
N |
N |
0 |
1.899 |
3.341 |
-1.148 |
29 |
H3 |
H |
H3 |
N |
N |
N |
0 |
4.301 |
3.949 |
-0.964 |
30 |
H4 |
H |
H4 |
N |
N |
N |
0 |
5.875 |
2.435 |
0.064 |
31 |
H5 |
H |
H5 |
N |
N |
N |
0 |
2.033 |
-1.235 |
1.055 |
32 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-7.86 |
-0.91 |
1.792 |
33 |
H7 |
H |
H7 |
N |
N |
N |
0 |
-8.458 |
0.679 |
1.257 |
34 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-7.903 |
-0.514 |
0.058 |
35 |
H9 |
H |
H9 |
N |
N |
N |
0 |
6.169 |
-0.057 |
1.309 |
36 |
H10 |
H |
H10 |
N |
N |
N |
0 |
-5.038 |
1.811 |
1.978 |
37 |
H11 |
H |
H11 |
N |
N |
N |
0 |
-6.701 |
2.407 |
1.76 |
38 |
H12 |
H |
H12 |
N |
N |
N |
0 |
-6.332 |
1.261 |
3.071 |
39 |
H13 |
H |
H13 |
N |
N |
N |
0 |
-4.001 |
1.502 |
0.207 |
40 |
H14 |
H |
H14 |
N |
N |
N |
0 |
-3.631 |
0.356 |
1.518 |
41 |
H15 |
H |
H15 |
N |
N |
N |
0 |
-3.062 |
-1.379 |
-0.159 |
42 |
H16 |
H |
H16 |
N |
N |
N |
0 |
-3.432 |
-0.234 |
-1.47 |
43 |
H17 |
H |
H17 |
N |
N |
N |
0 |
-2.149 |
-1.804 |
-1.995 |
44 |
H18 |
H |
H18 |
N |
N |
N |
0 |
-0.428 |
-2.861 |
-3.402 |
45 |
H19 |
H |
H19 |
N |
N |
N |
0 |
1.89 |
-2.038 |
-3.345 |
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