Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VV0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 30


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 2.138 0.399 0.098
2 C7 C C1 N N N 0 1.154 -0.521 0.145
3 C8 C C2 N N N 0 3.539 -0.023 0.171
4 C9 C C3 N N N 0 4.03 -0.404 -1.227
5 C1 C C4 N Y N 0 -2.593 -0.651 0.041
6 C5 C C5 N Y N 0 -1.892 1.651 -0.131
7 C6 C C6 N Y N 0 -2.907 0.699 -0.082
8 C4 C C7 N Y N 0 -0.575 1.259 -0.058
9 C3 C C8 N Y N 0 -0.257 -0.097 0.066
10 C2 C C9 N Y N 0 -1.278 -1.05 0.115
11 O O O1 N N N 0 1.429 -1.701 0.252
12 C10 C C10 N N N 0 4.39 1.127 0.714
13 N N N2 N N N 0 -4.237 1.099 -0.156
14 C C C11 N N N 0 -3.695 -1.678 0.1
15 H1 H H1 N N N 0 1.918 1.34 0.012
16 H2 H H2 N N N 0 3.625 -0.883 0.834
17 H3 H H3 N N N 0 5.072 -0.718 -1.173
18 H4 H H4 N N N 0 3.423 -1.224 -1.614
19 H5 H H5 N N N 0 3.943 0.456 -1.89
20 H6 H H6 N N N 0 -2.138 2.698 -0.228
21 H7 H H7 N N N 0 0.212 1.997 -0.097
22 H8 H H8 N N N 0 -1.036 -2.098 0.211
23 H9 H H9 N N N 0 4.04 1.399 1.709
24 H10 H H10 N N N 0 5.432 0.814 0.767
25 H11 H H11 N N N 0 4.303 1.988 0.05
26 H12 H H12 N N N 0 -4.945 0.437 -0.122
27 H13 H H13 N N N 0 -4.456 2.04 -0.242
28 H14 H H14 N N N 0 -3.935 -2.012 -0.909
29 H15 H H15 N N N 0 -3.368 -2.529 0.697
30 H16 H H16 N N N 0 -4.581 -1.234 0.555