Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VVC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 31


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -2.935 1.585 0.179
2 C5 C C2 R N N 0 -0.134 -0.716 -0.215
3 C6 C C3 N N N 0 2.135 -1.203 -0.99
4 C11 C C4 S N N 0 -2.002 -0.46 1.328
5 C7 C C5 N N N 0 3.463 -0.937 -0.992
6 C8 C C6 N N N 0 3.951 0.113 -0.187
7 C9 C C7 N N N 0 1.801 0.551 0.537
8 C10 C C8 N N N 0 -0.608 -1.114 1.201
9 N1 N N1 N N N 0 1.306 -0.447 -0.216
10 N2 N N2 N N N 0 5.295 0.405 -0.171
11 C3 C C9 R N N 0 -2.206 0.256 -0.026
12 N3 N N3 N N N 0 3.106 0.817 0.554
13 C1 C C10 N N N 0 -3.562 -1.29 -1.69
14 C2 C C11 N N N 0 -2.96 -0.604 -0.952
15 O1 O O1 N N N 0 -3.217 2.175 -1.092
16 O2 O O2 N N N 0 -0.87 0.487 -0.525
17 O3 O O3 N N N 0 1.043 1.224 1.216
18 O4 O O4 N N N 0 -3.007 -1.457 1.524
19 H1 H H1 N N N 0 -3.869 1.408 0.712
20 H2 H H2 N N N 0 -2.306 2.259 0.761
21 H3 H H3 N N N 0 -0.374 -1.503 -0.93
22 H4 H H4 N N N 0 1.737 -2.001 -1.598
23 H5 H H5 N N N 0 -2.015 0.26 2.147
24 H6 H H6 N N N 0 4.138 -1.52 -1.601
25 H7 H H7 N N N 0 -0.685 -2.198 1.287
26 H8 H H8 N N N 0 0.071 -0.717 1.956
27 H9 H H9 N N N 0 5.91 -0.112 -0.714
28 H10 H H10 N N N 0 5.628 1.127 0.384
29 H11 H H11 N N N 0 -4.1 -1.904 -2.351
30 H12 H H12 N N N 0 -3.679 3.022 -1.038
31 H13 H H13 N N N 0 -2.927 -1.938 2.359