Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VZP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 0.619 -0.362 0.221
2 C4 C C1 N N N 0 0.612 -1.71 0.794
3 C5 C C2 R N N 0 -0.64 0.37 0.055
4 C6 C C3 N N N 0 -1.319 0.548 1.424
5 C7 C C4 N N N 0 -2.77 1.018 1.142
6 C8 C C5 N N N 0 -1.585 -0.428 -0.865
7 O2 O O1 N N N 0 -3.953 0.733 -1.229
8 S S S1 N N N 0 -3.27 -0.051 -0.261
9 O1 O O2 N N N 0 -3.869 -1.237 0.242
10 C3 C C6 N N N 0 1.783 0.208 -0.147
11 O O O3 N N N 0 1.788 1.33 -0.618
12 N N N2 N N N 0 2.941 -0.464 0.005
13 C1 C C7 N N N 0 4.206 0.156 -0.396
14 C2 C C8 N N N 0 4.732 1.027 0.747
15 C C C9 N N N 0 5.229 -0.936 -0.717
16 H1 H H1 N N N 0 0.503 -2.444 -0.005
17 H2 H H2 N N N 0 1.55 -1.885 1.322
18 H3 H H3 N N N 0 -0.22 -1.805 1.491
19 H4 H H4 N N N 0 -0.441 1.347 -0.385
20 H5 H H5 N N N 0 -1.332 -0.401 1.961
21 H6 H H6 N N N 0 -0.789 1.3 2.009
22 H7 H H7 N N N 0 -3.408 0.844 2.008
23 H8 H H8 N N N 0 -2.786 2.07 0.856
24 H9 H H9 N N N 0 -1.472 -0.101 -1.899
25 H10 H H10 N N N 0 -1.382 -1.496 -0.783
26 H11 H H11 N N N 0 2.936 -1.358 0.381
27 H12 H H12 N N N 0 4.044 0.773 -1.279
28 H13 H H13 N N N 0 4.893 0.41 1.63
29 H14 H H14 N N N 0 5.673 1.488 0.448
30 H15 H H15 N N N 0 4.003 1.805 0.975
31 H16 H H16 N N N 0 4.855 -1.557 -1.531
32 H17 H H17 N N N 0 6.171 -0.475 -1.015
33 H18 H H18 N N N 0 5.391 -1.553 0.167