Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WBB

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C7 C C1 N N N 0 0.21 -0.119 -1.183
2 C8 C C2 N N N 0 1.257 -0.158 -0.1
3 C9 C C3 N N N 0 4.89 -0.062 0.108
4 O1 O O1 N N N 0 3.548 -0.134 0.594
5 C1 C C4 N Y N 0 -1.781 0.945 -0.103
6 C5 C C5 N Y N 0 -1.796 -1.424 -0.447
7 C6 C C6 N Y N 0 -1.16 -0.201 -0.56
8 C4 C C7 N Y N 0 -3.052 -1.499 0.124
9 C3 C C8 N Y N 0 -3.676 -0.352 0.577
10 C2 C C9 N Y N 0 -3.038 0.87 0.469
11 O O O2 N N N 0 0.924 -0.244 1.063
12 N N N1 N N N 0 2.564 -0.097 -0.424
13 C C C10 N N N 0 -1.086 2.277 -0.221
14 H1 H H1 N N N 0 0.3 0.812 -1.742
15 H2 H H2 N N N 0 0.353 -0.963 -1.858
16 H3 H H3 N N N 0 5.082 -0.905 -0.556
17 H4 H H4 N N N 0 5.028 0.871 -0.44
18 H5 H H5 N N N 0 5.583 -0.096 0.948
19 H6 H H6 N N N 0 -1.309 -2.321 -0.801
20 H7 H H7 N N N 0 -3.549 -2.454 0.212
21 H8 H H8 N N N 0 -4.657 -0.41 1.023
22 H9 H H9 N N N 0 -3.521 1.765 0.831
23 H10 H H10 N N N 0 2.83 -0.029 -1.354
24 H11 H H11 N N N 0 -0.49 2.457 0.674
25 H12 H H12 N N N 0 -0.435 2.271 -1.095
26 H13 H H13 N N N 0 -1.829 3.067 -0.326