Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WT5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 62


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -3.845 -0.362 0.555
2 N3 N N2 N N N 0 2.248 0.918 0.251
3 C4 C C1 N N N 0 -4.663 0.858 0.58
4 C5 C C2 R N N 0 -4.684 -1.565 0.634
5 C6 C C3 N N N 0 -3.792 -2.808 0.65
6 C7 C C4 N N N 0 -2.844 -0.346 1.63
7 C8 C C5 N Y N 0 -1.918 0.826 1.437
8 C10 C C6 N N N 0 1.136 1.523 -0.487
9 C13 C C7 N Y N 0 4.786 0.676 -2.401
10 C15 C C8 N Y N 0 5.841 0.112 -1.713
11 C17 C C9 N Y N 0 6.835 -0.801 0.381
12 C20 C C10 N Y N 0 8.054 -1.681 2.015
13 C21 C C11 N Y N 0 4.506 0.077 0.298
14 C22 C C12 N Y N 0 -0.226 2.924 1.068
15 C24 C C13 N Y N 0 -2.166 2.011 2.105
16 C1 C C14 R N N 0 -5.615 -1.62 -0.579
17 C11 C C15 N Y N 0 3.454 0.648 -0.4
18 C12 C C16 N Y N 0 3.597 0.947 -1.751
19 C14 C C17 N N N 0 4.933 1.003 -3.865
20 C16 C C18 N Y N 0 5.708 -0.191 -0.357
21 C18 C C19 N Y N 0 8.057 -1.113 -0.136
22 C19 C C20 N Y N 0 8.821 -1.668 0.904
23 C2 C C21 R N N 0 -6.491 -0.364 -0.602
24 C23 C C22 N Y N 0 -1.308 3.083 1.921
25 C3 C C23 S N N 0 -5.593 0.875 -0.635
26 C9 C C24 N Y N 0 -0.039 1.709 0.438
27 N2 N N3 N Y N 0 -0.876 0.709 0.637
28 N4 N N4 N Y N 0 6.839 -1.146 1.708
29 O1 O O1 N N N 0 -6.445 -2.78 -0.491
30 O2 O O2 N N N 0 -7.323 -0.384 -1.763
31 O3 O O3 N N N 0 -6.402 2.052 -0.6
32 O4 O O4 N N N 0 -3.072 -2.892 -0.581
33 H2 H H2 N N N 0 2.147 0.706 1.192
34 H3 H H3 N N N 0 -5.258 0.878 1.493
35 H4 H H4 N N N 0 -4.012 1.732 0.551
36 H5 H H5 N N N 0 -5.279 -1.533 1.547
37 H6 H H6 N N N 0 -3.088 -2.739 1.479
38 H7 H H7 N N N 0 -4.41 -3.697 0.771
39 H8 H H8 N N N 0 -3.346 -0.258 2.593
40 H9 H H9 N N N 0 -2.269 -1.272 1.604
41 H10 H H10 N N N 0 1.445 2.491 -0.881
42 H11 H H11 N N N 0 0.85 0.869 -1.311
43 H12 H H12 N N N 0 6.77 -0.094 -2.224
44 H13 H H13 N N N 0 8.355 -2.048 2.985
45 H14 H H14 N N N 0 4.398 -0.156 1.347
46 H15 H H15 N N N 0 0.463 3.739 0.901
47 H16 H H16 N N N 0 -3.019 2.099 2.762
48 H17 H H17 N N N 0 -5.02 -1.666 -1.492
49 H18 H H18 N N N 0 2.776 1.393 -2.293
50 H19 H H19 N N N 0 4.626 0.144 -4.462
51 H20 H H20 N N N 0 4.305 1.859 -4.111
52 H21 H H21 N N N 0 5.974 1.243 -4.081
53 H22 H H22 N N N 0 8.378 -0.961 -1.156
54 H23 H H23 N N N 0 9.837 -2.025 0.826
55 H24 H H24 N N N 0 -7.114 -0.339 0.292
56 H25 H H25 N N N 0 -1.477 4.021 2.43
57 H26 H H26 N N N 0 -4.998 0.869 -1.549
58 H27 H H27 N N N 0 6.097 -1.035 2.323
59 H28 H H28 N N N 0 -7.061 -2.879 -1.23
60 H29 H H29 N N N 0 -7.907 0.383 -1.842
61 H30 H H30 N N N 0 -5.898 2.877 -0.618
62 H31 H H31 N N N 0 -2.485 -3.659 -0.642