Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : WYF

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -1.645 5.226 0.796
2 N1 N N1 N Y N 0 -3.544 -0.642 -0.4
3 O1 O O1 N N N 0 -0.99 3.976 1.019
4 C2 C C2 N Y N 0 -1.662 2.852 0.651
5 N2 N N2 N N N 0 -4.234 -3.316 -0.44
6 O2 O O2 N N N 0 2.381 -2.573 1.793
7 C3 C C3 N Y N 0 -2.925 2.973 0.089
8 O3 O O3 N N N 0 1.151 -0.133 -0.287
9 C4 C C4 N Y N 0 -3.664 1.872 -0.308
10 O4 O O4 N N N 0 5.227 1.806 -2.108
11 C5 C C5 N Y N 0 -3.087 0.617 -0.121
12 O5 O O5 N N N 0 5.277 -1.78 1.008
13 C6 C C6 N Y N 0 -1.8 0.495 0.452
14 C7 C C7 N Y N 0 -1.066 1.612 0.847
15 C8 C C8 N Y N 0 -1.509 -0.939 0.501
16 C9 C C9 N Y N 0 -2.611 -1.572 -0.031
17 C10 C C10 N N N 0 -4.834 -1.005 -1.01
18 C11 C C11 N N N 0 -4.743 -2.45 -1.513
19 C12 C C12 N N N 0 -2.802 -3.061 -0.197
20 C13 C C13 N N N 0 -0.294 -1.572 1.011
21 C14 C C14 N N N 0 0.927 -1.138 0.593
22 C15 C C15 N N N 0 2.182 -1.662 1.007
23 C16 C C16 N Y N 0 3.188 -0.869 0.285
24 C17 C C17 N Y N 0 4.588 -0.887 0.253
25 C18 C C18 N Y N 0 5.265 0.012 -0.551
26 C19 C C19 N Y N 0 4.556 0.926 -1.322
27 C20 C C20 N Y N 0 3.169 0.948 -1.295
28 C21 C C21 N Y N 0 2.473 0.055 -0.495
29 H1 H H1 N N N 0 -1.852 5.343 -0.268
30 H1A H H1A N N N 0 -2.582 5.249 1.353
31 H1B H H1B N N N 0 -1.002 6.038 1.133
32 HN2 H HN2 N N N 0 -4.774 -3.201 0.405
33 H3 H H3 N N N 0 -3.346 3.959 -0.043
34 H4 H H4 N N N 0 -4.647 1.98 -0.744
35 HO4 H HO4 N N N 0 5.399 1.481 -3.003
36 HO5 H HO5 N N N 0 5.454 -2.619 0.56
37 H7 H H7 N N N 0 -0.083 1.518 1.284
38 H10 H H10 N N N 0 -5.626 -0.925 -0.266
39 H10A H H10A N N N 0 -5.043 -0.339 -1.847
40 H11 H H11 N N N 0 -4.068 -2.497 -2.368
41 H11A H H11A N N N 0 -5.734 -2.789 -1.814
42 H12 H H12 N N N 0 -2.486 -3.573 0.712
43 H12A H H12A N N N 0 -2.216 -3.418 -1.044
44 H13 H H13 N N N 0 -0.365 -2.385 1.719
45 H18 H H18 N N N 0 6.344 0.005 -0.58
46 H20 H H20 N N N 0 2.63 1.664 -1.898