Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WYW

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 36


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 1.12 0.222 0.868
2 N3 N N2 N Y N 0 0.579 2.099 -0.036
3 C4 C C1 N N N 0 -6.06 0.464 0.648
4 C5 C C2 N Y N 0 0.14 1.075 0.7
5 C6 C C3 N Y N 0 1.837 1.915 -0.346
6 C7 C C4 N Y N 0 3.51 0.172 0.106
7 C8 C C5 N Y N 0 4.518 0.821 -0.595
8 C10 C C6 N Y N 0 6.03 -0.959 -0.062
9 C1 C C7 N N N 0 -1.798 -3.73 -0.442
10 C11 C C8 N Y N 0 5.028 -1.607 0.637
11 C12 C C9 N Y N 0 3.769 -1.045 0.722
12 C2 C C10 N N N 0 -2.298 -2.318 -0.756
13 C3 C C11 N N N 0 -4.782 0.126 -0.121
14 C9 C C12 N Y N 0 5.775 0.254 -0.677
15 N2 N N3 N Y N 0 2.236 0.748 0.195
16 O1 O O1 N N N 0 -1.801 -1.408 0.227
17 O2 O O2 N N N 0 -3.645 0.407 0.698
18 O3 O O3 N N N 0 -1.119 0.94 1.194
19 P1 P P1 N N N 0 -2.13 0.169 0.207
20 S1 S S1 N N N 0 -1.928 0.824 -1.526
21 H1 H H1 N N N 0 -6.927 0.25 0.023
22 H2 H H2 N N N 0 -6.109 -0.138 1.555
23 H3 H H3 N N N 0 -6.056 1.521 0.913
24 H4 H H4 N N N 0 2.45 2.582 -0.934
25 H5 H H5 N N N 0 4.32 1.767 -1.076
26 H6 H H6 N N N 0 7.013 -1.4 -0.127
27 H7 H H7 N N N 0 -2.177 -4.425 -1.191
28 H8 H H8 N N N 0 -0.708 -3.741 -0.454
29 H9 H H9 N N N 0 -2.153 -4.03 0.544
30 H10 H H10 N N N 0 5.23 -2.553 1.116
31 H11 H H11 N N N 0 2.987 -1.551 1.268
32 H12 H H12 N N N 0 -1.943 -2.018 -1.742
33 H13 H H13 N N N 0 -3.388 -2.307 -0.744
34 H14 H H14 N N N 0 -4.786 -0.932 -0.386
35 H15 H H15 N N N 0 -4.733 0.728 -1.029
36 H16 H H16 N N N 0 6.56 0.757 -1.222