Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : X57

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O5 O O1 N N N 0 -4.3 0.625 -0.458
2 C9 C C1 N N N 0 -3.635 1.082 0.448
3 N2 N N1 N N N 0 -4.179 1.975 1.299
4 C1 C C2 S N N 0 -2.204 0.647 0.626
5 C2 C C3 N N N 0 -1.327 1.4 -0.336
6 C3 C C4 N N N 0 -0.452 0.832 -1.104
7 C8 C C5 N N N 0 0.37 1.718 -2.004
8 C4 C C6 R N N 0 -0.199 -0.645 -1.16
9 C5 C C7 N N N 0 -0.742 -1.328 0.098
10 N N N2 N N N 0 -2.09 -0.793 0.357
11 C C C8 N N N 0 -3.176 -1.592 0.347
12 O O O2 N N N 0 -3.046 -2.79 0.207
13 N1 N N3 N N N 0 1.247 -0.887 -1.258
14 O2 O O3 N N N 0 1.951 -0.331 -0.101
15 C6 C C9 R N N 0 3.366 -0.531 -0.131
16 F F F1 N N N 0 3.679 -1.74 0.498
17 C7 C C10 N N N 0 4.048 0.603 0.59
18 O4 O O4 N N N 0 4.997 1.319 -0.033
19 O3 O O5 N N N 0 3.741 0.867 1.728
20 H1 H H1 N N N 0 -5.102 2.251 1.187
21 H2 H H2 N N N 0 -3.648 2.34 2.023
22 H3 H H3 N N N 0 -1.884 0.854 1.647
23 H4 H H4 N N N 0 -1.433 2.473 -0.391
24 H5 H H5 N N N 0 0.077 2.758 -1.856
25 H6 H H6 N N N 0 1.426 1.6 -1.764
26 H7 H H7 N N N 0 0.199 1.438 -3.043
27 H8 H H8 N N N 0 -0.694 -1.063 -2.036
28 H9 H H9 N N N 0 -0.796 -2.405 -0.06
29 H10 H H10 N N N 0 -0.091 -1.112 0.946
30 H11 H H11 N N N 0 -4.161 -1.166 0.463
31 H12 H H12 N N N 0 1.443 -1.871 -1.362
32 H13 H H13 N N N 0 3.707 -0.561 -1.166
33 H14 H H14 N N N 0 5.406 2.037 0.47