Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : X8Q

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 36


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -0.847 -1.634 1.715
2 O2 O O2 N N N 0 0.211 -3.389 0.241
3 O3 O O3 N N N 0 -2.332 -2.759 0.012
4 O4 O O4 N N N 0 -0.481 -1.038 -0.71
5 N N N1 N N N 0 3.659 -0.175 -0.416
6 CA C C1 N N N 0 2.539 0.768 -0.53
7 CB C C2 N N N 0 1.703 0.724 0.751
8 C2 C C3 N Y N 0 0.376 2.882 0.993
9 C3 C C4 N Y N 0 0.492 1.607 0.591
10 C4 C C5 N Y N 0 -1.268 0.067 -0.628
11 C5 C C6 N Y N 0 -2.553 0.044 -1.134
12 C6 C C7 N Y N 0 -3.359 1.171 -1.051
13 C7 C C8 N Y N 0 -2.892 2.328 -0.466
14 C8 C C9 N Y N 0 -1.6 2.375 0.051
15 C9 C C10 N Y N 0 -0.781 1.237 -0.031
16 CM C C11 N N N 0 4.344 -0.337 -1.706
17 CN C C12 N N N 0 4.6 0.248 0.629
18 N1 N N2 N Y N 0 -0.868 3.358 0.678
19 P P P1 N N N 0 -0.862 -2.193 0.345
20 H3 H H1 N N N 0 0.043 -4.121 0.85
21 H4 H H2 N N N 0 -2.41 -3.159 -0.865
22 HA2 H H4 N N N 0 2.926 1.776 -0.677
23 HA1 H H5 N N N 0 1.915 0.491 -1.38
24 HB2 H H6 N N N 0 1.383 -0.301 0.94
25 HB1 H H7 N N N 0 2.303 1.077 1.589
26 H2 H H8 N N N 0 1.148 3.448 1.494
27 H5 H H9 N N N 0 -2.933 -0.855 -1.596
28 H6 H H10 N N N 0 -4.362 1.141 -1.449
29 H7 H H11 N N N 0 -3.529 3.198 -0.408
30 HM1 H H12 N N N 0 5.169 -1.041 -1.594
31 HM3 H H13 N N N 0 3.64 -0.718 -2.446
32 HM2 H H14 N N N 0 4.731 0.627 -2.036
33 HN3 H H15 N N N 0 4.082 0.293 1.587
34 HN2 H H16 N N N 0 5.419 -0.467 0.692
35 HN1 H H17 N N N 0 4.996 1.234 0.384
36 H1 H H18 N N N 0 -1.188 4.253 0.872