Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : XFM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 51


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 4.024 -0.984 -0.88
2 C2 C C2 N Y N 0 3.93 -0.332 0.264
3 C3 C C3 N Y N 0 4.968 -0.343 1.173
4 C4 C C4 N Y N 0 6.126 -1.051 0.875
5 C5 C C5 N Y N 0 6.196 -1.724 -0.331
6 C6 C C6 N Y N 0 5.111 -1.669 -1.2
7 C7 C C7 N N N 0 2.672 0.435 0.581
8 C8 C C8 N N N 0 2.38 1.426 -0.548
9 C9 C C9 N Y N 0 1.122 2.192 -0.231
10 N10 N N10 N Y N 0 0.007 1.537 0.028
11 C11 C C11 N Y N 0 -1.117 2.165 0.311
12 C12 C C12 N Y N 0 -1.165 3.546 0.346
13 C13 C C13 N Y N 0 -0.013 4.27 0.08
14 C14 C C14 N Y N 0 1.151 3.574 -0.209
15 C15 C C15 N N N 0 -2.364 1.369 0.599
16 C16 C C16 N N N 0 -2.641 0.417 -0.567
17 C17 C C17 N Y N 0 -3.888 -0.379 -0.279
18 C18 C C18 N Y N 0 -3.816 -1.593 0.392
19 C19 C C19 N Y N 0 -4.976 -2.298 0.64
20 N20 N N20 N Y N 0 -6.147 -1.833 0.249
21 C21 C C21 N Y N 0 -6.257 -0.68 -0.393
22 C22 C C22 N Y N 0 -5.13 0.085 -0.672
23 N23 N N23 N N N 0 -7.511 -0.228 -0.788
24 C24 C C24 N N N 0 -4.904 -3.616 1.368
25 C25 C C25 N N N 0 7.279 -1.084 1.844
26 N26 N N26 N N N 0 5.167 -2.342 -2.416
27 H3 H H3 N N N 0 4.882 0.193 2.106
28 H5 H H5 N N N 0 7.081 -2.284 -0.595
29 H7 H H7 N N N 0 1.838 -0.26 0.679
30 H7A H H7A N N N 0 2.804 0.978 1.516
31 H8 H H8 N N N 0 3.214 2.121 -0.646
32 H8A H H8A N N N 0 2.248 0.882 -1.484
33 H12 H H12 N N N 0 -2.089 4.056 0.578
34 H13 H H13 N N N 0 -0.021 5.349 0.1
35 H14 H H14 N N N 0 2.067 4.105 -0.421
36 H15 H H15 N N N 0 -2.223 0.793 1.513
37 H15A H H15A N N N 0 -3.207 2.047 0.723
38 H16 H H16 N N N 0 -2.781 0.994 -1.481
39 H16A H H16A N N N 0 -1.797 -0.261 -0.691
40 H18 H H18 N N N 0 -2.861 -1.981 0.715
41 H22 H H22 N N N 0 -5.223 1.027 -1.192
42 HN23 H HN23 N N N 0 -8.301 -0.757 -0.593
43 HN2A H HN2A N N N 0 -7.597 0.615 -1.258
44 H24 H H24 N N N 0 -4.992 -3.444 2.44
45 H24A H H24A N N N 0 -5.719 -4.259 1.035
46 H24B H H24B N N N 0 -3.95 -4.097 1.154
47 H25 H H25 N N N 0 7.16 -1.929 2.522
48 H25A H H25A N N N 0 8.214 -1.19 1.293
49 H25B H H25B N N N 0 7.298 -0.158 2.418
50 HN26 H HN26 N N N 0 5.961 -2.846 -2.655
51 HN2B H HN2B N N N 0 4.413 -2.307 -3.025