Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : XIP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 31


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -3.636 0.876 -0.607
2 C3 C C2 N Y N 0 -2.283 -1.008 0.02
3 C4 C C3 N N N 0 -1.941 -2.433 -0.121
4 C6 C C4 N Y N 0 0.42 -1.816 -0.104
5 C13 C C5 N Y N 0 -1.574 -0.202 0.916
6 C14 C C6 N Y N 0 -1.904 1.128 1.054
7 N N N1 N N N 0 -3.255 3.023 0.423
8 C C C7 N Y N 0 -2.931 1.673 0.29
9 O O O1 N N N 0 4.624 0.895 0.578
10 C10 C C8 N N N 0 3.52 1.073 -0.174
11 C11 C C9 N Y N 0 1.296 0.254 -0.93
12 C12 C C10 N Y N 0 0.297 -0.677 -0.908
13 C2 C C11 N Y N 0 -3.319 -0.457 -0.741
14 C5 C C12 N N N 0 -0.654 -2.822 -0.085
15 C7 C C13 N Y N 0 1.567 -2.001 0.677
16 C8 C C14 N Y N 0 2.565 -1.07 0.654
17 C9 C C15 N Y N 0 2.442 0.068 -0.149
18 O1 O O2 N N N 0 3.414 2.062 -0.873
19 H2 H H1 N N N 0 -4.435 1.303 -1.194
20 H4 H H2 N N N 0 -2.723 -3.166 -0.254
21 H11 H H3 N N N 0 -0.773 -0.624 1.506
22 H12 H H4 N N N 0 -1.357 1.751 1.746
23 H H H5 N N N 0 -3.97 3.405 -0.109
24 H1 H H6 N N N 0 -2.764 3.58 1.048
25 H8 H H7 N N N 0 5.305 1.581 0.529
26 H9 H H8 N N N 0 1.201 1.133 -1.55
27 H10 H H9 N N N 0 -0.588 -0.534 -1.511
28 H3 H H10 N N N 0 -3.869 -1.076 -1.434
29 H5 H H11 N N N 0 -0.408 -3.873 -0.041
30 H6 H H12 N N N 0 1.662 -2.88 1.297
31 H7 H H13 N N N 0 3.45 -1.213 1.256