Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : XKL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O28 O O28 N N N 0 5.316 -0.545 1.656
2 C24 C C24 N N N 0 4.921 -0.896 0.561
3 N25 N N25 N N N 0 5.624 -1.798 -0.151
4 C26 C C26 N N N 0 6.864 -2.357 0.394
5 C27 C C27 N N N 0 7.459 -3.35 -0.607
6 C22 C C22 N Y N 0 3.663 -0.334 0.012
7 N21 N N21 N Y N 0 3.116 -0.616 -1.146
8 O20 O O20 N Y N 0 2.089 -0.002 -1.319
9 C23 C C23 N Y N 0 2.809 0.609 0.638
10 C19 C C19 N Y N 0 1.804 0.795 -0.274
11 C5 C C5 N Y N 0 0.637 1.686 -0.134
12 C4 C C4 N Y N 0 0.816 3.075 -0.073
13 O7 O O7 N N N 0 2.065 3.604 -0.143
14 C3 C C3 N Y N 0 -0.283 3.906 0.057
15 C2 C C2 N Y N 0 -1.56 3.367 0.128
16 O8 O O8 N N N 0 -2.634 4.188 0.257
17 C6 C C6 N Y N 0 -0.656 1.15 -0.068
18 C1 C C1 N Y N 0 -1.745 1.992 0.068
19 O9 O O9 N N N 0 -0.839 -0.194 -0.131
20 C10 C C10 N Y N 0 -2.11 -0.669 -0.069
21 C15 C C15 N Y N 0 -2.844 -0.843 -1.234
22 C14 C C14 N Y N 0 -4.137 -1.325 -1.168
23 C13 C C13 N Y N 0 -4.7 -1.634 0.056
24 N16 N N16 N N N 1 -6.086 -2.15 0.124
25 O18 O O18 N N N -1 -6.729 -2.303 -0.899
26 O17 O O17 N N N 0 -6.582 -2.422 1.202
27 C12 C C12 N Y N 0 -3.97 -1.461 1.218
28 C11 C C11 N Y N 0 -2.675 -0.985 1.158
29 H25 H H25 N N N 0 5.308 -2.078 -1.025
30 H261 H H261 N N N 0 7.576 -1.553 0.574
31 H262 H H262 N N N 0 6.65 -2.871 1.331
32 H271 H H271 N N N 0 6.746 -4.155 -0.788
33 H272 H H272 N N N 0 7.673 -2.836 -1.545
34 H273 H H273 N N N 0 8.381 -3.766 -0.202
35 H23 H H23 N N N 0 2.925 1.074 1.606
36 H7 H H7 N N N 0 2.357 3.805 -1.042
37 H3 H H3 N N N 0 -0.146 4.976 0.104
38 H8 H H8 N N N 0 -3.014 4.473 -0.585
39 H1 H H1 N N N 0 -2.742 1.58 0.124
40 H15 H H15 N N N 0 -2.405 -0.602 -2.191
41 H11 H H11 N N N 0 -2.105 -0.854 2.065
42 H14 H H14 N N N 0 -4.709 -1.461 -2.075
43 H12 H H12 N N N 0 -4.412 -1.703 2.174