Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : YBU

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 3.618 -0.835 -0.001
2 C2 C C2 N Y N 0 2.311 -0.164 0.0
3 N1 N N1 N Y N 0 2.104 1.135 0.002
4 N2 N N2 N Y N 0 0.837 1.364 0.002
5 C3 C C3 N Y N 0 0.186 0.219 0.0
6 C4 C C4 N Y N 0 -1.281 0.048 0.0
7 C5 C C5 N Y N 0 -1.837 -1.233 0.003
8 C6 C C6 N Y N 0 -3.208 -1.385 0.003
9 C7 C C7 N Y N 0 -4.031 -0.273 0.0
10 C8 C C8 N Y N 0 -3.486 0.999 -0.004
11 C9 C C9 N Y N 0 -2.117 1.166 0.002
12 O1 O O1 N Y N 0 1.103 -0.767 -0.007
13 N3 N N3 N N N 0 4.707 -0.133 0.001
14 H1 H H1 N N N 0 3.671 -1.914 0.002
15 H2 H H2 N N N 0 -1.196 -2.102 0.005
16 H3 H H3 N N N 0 -3.64 -2.375 0.005
17 H4 H H4 N N N 0 -5.104 -0.398 0.0
18 H5 H H5 N N N 0 -4.135 1.863 -0.008
19 H6 H H6 N N N 0 -1.693 2.159 0.003
20 H7 H H7 N N N 0 5.57 -0.576 0.001