Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : YBV

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 25


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C11 C C1 N N N 0 0.151 -1.599 -0.153
2 C14 C C2 N N N 0 3.822 -1.622 0.077
3 C02 C C3 N N N 0 2.222 0.209 0.038
4 C03 C C4 N N N 0 0.905 0.688 -0.023
5 C05 C C5 N N N 0 -0.135 -0.218 -0.119
6 C07 C C6 N N N 0 -2.542 -0.741 -0.282
7 C08 C C7 N N N 0 -3.378 -0.87 1.003
8 C10 C C8 N N N 0 -3.814 -0.168 -0.934
9 N06 N N1 N N N 0 -1.446 0.226 -0.181
10 N09 N N2 N N N 0 -4.233 0.197 0.437
11 N12 N N3 N N N 0 1.383 -2.02 -0.09
12 N13 N N4 N N N 0 2.449 -1.118 0.008
13 O01 O O1 N N N 0 3.157 0.991 0.122
14 CL04 CL CL1 N N N 0 0.586 2.395 0.014
15 H1 H H1 N N N 0 -0.656 -2.313 -0.228
16 H2 H H2 N N N 0 4.099 -1.782 1.119
17 H3 H H3 N N N 0 3.891 -2.565 -0.465
18 H4 H H4 N N N 0 4.499 -0.895 -0.371
19 H6 H H6 N N N 0 -2.228 -1.697 -0.699
20 H7 H H7 N N N 0 -3.884 -1.83 1.104
21 H8 H H8 N N N 0 -2.845 -0.572 1.906
22 H9 H H9 N N N 0 -3.628 0.69 -1.58
23 H10 H H10 N N N 0 -4.445 -0.924 -1.402
24 H11 H H11 N N N 0 -1.637 1.176 -0.157
25 H12 H H12 N N N 0 -5.21 -0.007 0.582