Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : Z7F

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 76


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -3.316 -0.961 0.259
2 C2 C C2 N Y N 0 -2.853 -0.741 -1.031
3 C3 C C3 N Y N 0 -1.512 -0.521 -1.25
4 C4 C C4 N Y N 0 -0.607 -0.515 -0.192
5 C5 C C5 N Y N 0 -1.069 -0.733 1.087
6 C6 C C6 N Y N 0 -2.42 -0.949 1.314
7 C7 C C7 R N N 0 0.834 -0.27 -0.513
8 C8 C C8 R N N 0 1.71 -0.087 0.736
9 C9 C C9 N N N 0 1.276 -1.078 1.819
10 C10 C C10 N N N 0 -0.141 -0.739 2.274
11 C11 C C11 N N N 0 1.46 -1.519 -1.177
12 C12 C C12 N N N 0 2.963 -1.354 -0.864
13 N1 N N1 N N N 0 3.072 -0.459 0.298
14 S1 S S1 N N N 0 0.989 1.176 -1.597
15 O1 O O1 N N N 0 -4.638 -1.179 0.484
16 O2 O O2 N N N 0 2.34 1.613 -1.654
17 O3 O O3 N N N 0 0.227 0.995 -2.782
18 C13 C C13 N Y N 0 0.152 2.464 -0.734
19 C14 C C14 N Y N 0 -1.206 2.648 -0.916
20 C15 C C15 N Y N 0 -1.863 3.658 -0.239
21 C16 C C16 N Y N 0 -1.162 4.485 0.621
22 C17 C C17 N Y N 0 0.198 4.3 0.803
23 C18 C C18 N Y N 0 0.853 3.286 0.129
24 F1 F F1 N N N 0 -1.803 5.473 1.283
25 C19 C C19 N N N 0 -5.5 -1.176 -0.655
26 C20 C C20 N Y N 0 -6.918 -1.433 -0.213
27 C21 C C21 N Y N 0 -7.396 -2.73 -0.138
28 C22 C C22 N Y N 0 -8.697 -2.965 0.273
29 C23 C C23 N Y N 0 -9.517 -1.905 0.609
30 C24 C C24 N Y N 0 -9.04 -0.609 0.533
31 C25 C C25 N Y N 0 -7.741 -0.373 0.123
32 C26 C C26 N N N 0 4.221 -0.047 0.868
33 O4 O O4 N N N 0 4.191 0.618 1.881
34 C27 C C27 N N N 0 5.544 -0.413 0.246
35 C28 C C28 N N N 0 6.589 0.643 0.613
36 C29 C C29 N N N 0 7.933 0.271 -0.019
37 C30 C C30 N N N 0 8.382 -1.094 0.504
38 C31 C C31 N N N 0 7.337 -2.15 0.137
39 C32 C C32 N N N 0 5.994 -1.779 0.769
40 CL1 CL CL1 N N N 0 -7.141 1.254 0.035
41 F2 F F2 N N N 0 -6.593 -3.766 -0.466
42 C33 C C33 N N N 0 9.705 -1.46 -0.118
43 O5 O O5 N N N 0 10.234 -0.706 -0.899
44 O6 O O6 N N N 0 10.295 -2.624 0.196
45 H1 H H1 N N N 0 -3.544 -0.744 -1.862
46 H2 H H2 N N N 0 -1.157 -0.351 -2.256
47 H3 H H3 N N N 0 -2.775 -1.114 2.321
48 H4 H H4 N N N 0 1.666 0.939 1.102
49 H6 H H5 N N N 0 1.295 -2.09 1.414
50 H5 H H6 N N N 0 1.956 -1.012 2.667
51 H8 H H7 N N N 0 -0.145 0.244 2.743
52 H7 H H8 N N N 0 -0.478 -1.485 2.994
53 H9 H H9 N N N 0 1.07 -2.432 -0.727
54 H10 H H10 N N N 0 1.286 -1.512 -2.253
55 H11 H H11 N N N 0 3.401 -2.324 -0.627
56 H12 H H12 N N N 0 3.474 -0.914 -1.72
57 H13 H H13 N N N 0 -1.753 2.003 -1.588
58 H14 H H14 N N N 0 -2.924 3.802 -0.382
59 H15 H H15 N N N 0 0.747 4.944 1.474
60 H16 H H16 N N N 0 1.913 3.138 0.274
61 H17 H H17 N N N 0 -5.444 -0.207 -1.151
62 H18 H H18 N N N 0 -5.188 -1.957 -1.349
63 H19 H H19 N N N 0 -9.07 -3.977 0.332
64 H23 H H23 N N N 0 6.27 1.616 0.24
65 H20 H H20 N N N 0 -10.532 -2.089 0.93
66 H21 H H21 N N N 0 -9.683 0.218 0.795
67 H22 H H22 N N N 0 5.437 -0.456 -0.838
68 H24 H H24 N N N 0 6.697 0.686 1.697
69 H25 H H26 N N N 0 8.677 1.023 0.243
70 H26 H H25 N N N 0 7.825 0.228 -1.102
71 H27 H H27 N N N 0 8.49 -1.051 1.588
72 H29 H H28 N N N 0 7.229 -2.193 -0.947
73 H28 H H29 N N N 0 7.657 -3.123 0.51
74 H30 H H30 N N N 0 6.101 -1.735 1.852
75 H31 H H31 N N N 0 5.249 -2.53 0.507
76 H32 H H32 N N N 0 11.143 -2.815 -0.228