Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 04X    

Bonds between two atoms of the molecule

Total Number of Bonds: 35


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C1 C C sing 1.53 N N
2 C2 O1 C O sing 1.43 N N
3 C CA C C sing 1.51 N N
4 C O C O doub 1.21 N N
5 N1 C1 N C sing 1.47 N N
6 N1 C0 N C sing 1.47 N N
7 N1 C4 N C sing 1.47 N N
8 O1 C3 O C sing 1.43 N N
9 CA N C N sing 1.47 N N
10 CA CB C C sing 1.53 N N
11 N CE N C sing 1.47 N N
12 C4 C3 C C sing 1.53 N N
13 CB CG C C sing 1.5 N N
14 CG CD C C doub 1.3 N N
15 CD CE C C sing 1.5 N N
16 CD C0 C C sing 1.51 N N
17 C2 H4 C H sing 1.09 N N
18 C2 H5 C H sing 1.09 N N
19 C1 H15 C H sing 1.09 N N
20 C1 H16 C H sing 1.09 N N
21 CA HA C H sing 1.09 N N
22 C4 H32 C H sing 1.09 N N
23 C4 H33 C H sing 1.09 N N
24 CB H39 C H sing 1.09 N N
25 CB H40 C H sing 1.09 N N
26 CG H41 C H sing 1.08 N N
27 CE H44 C H sing 1.09 N N
28 CE H45 C H sing 1.09 N N
29 C0 H55 C H sing 1.09 N N
30 C0 H56 C H sing 1.09 N N
31 C3 H63 C H sing 1.09 N N
32 C3 H64 C H sing 1.09 N N
33 C OXT C O sing 1.34 N N
34 OXT HXT O H sing 0.97 N N
35 N H N H sing 1.01 N N