Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 04Z    

Bonds between two atoms of the molecule

Total Number of Bonds: 45


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C1 C C doub 1.39 N Y
2 C5 C1 C C sing 1.38 N Y
3 C1 H1 C H sing 1.08 N N
4 C13 N1 C N sing 1.31 N Y
5 N1 C14 N C doub 1.3 N Y
6 O1 S2 O S doub 1.42 N N
7 C12 S1 C S sing 1.76 N Y
8 C14 S1 C S sing 1.71 N Y
9 C3 C2 C C sing 1.38 N Y
10 C2 O6 C O sing 1.36 N N
11 N2 C13 N C sing 1.39 N N
12 N2 HN2 N H sing 0.97 N N
13 N2 HN2A N H sing 0.97 N N
14 S2 O2 S O doub 1.42 N N
15 C18 S2 C S sing 1.76 N N
16 S2 N4 S N sing 1.66 N N
17 C10 C3 C C doub 1.39 N Y
18 C3 H3 C H sing 1.08 N N
19 C14 N3 C N sing 1.38 N N
20 N3 C15 N C sing 1.4 N N
21 N3 HN3 N H sing 0.97 N N
22 O3 C11 O C doub 1.22 N N
23 C10 C4 C C sing 1.39 N Y
24 C4 C5 C C doub 1.38 N Y
25 C4 H4 C H sing 1.08 N N
26 N4 HN4 N H sing 0.97 N N
27 N4 HN4A N H sing 0.97 N N
28 C5 H5 C H sing 1.08 N N
29 O6 C7 O C sing 1.43 N N
30 C7 H7 C H sing 1.09 N N
31 C7 H7A C H sing 1.09 N N
32 C7 H7B C H sing 1.09 N N
33 C11 C10 C C sing 1.48 N N
34 C11 C12 C C sing 1.41 N N
35 C13 C12 C C doub 1.38 N Y
36 C15 C20 C C doub 1.39 N Y
37 C15 C16 C C sing 1.39 N Y
38 C16 C17 C C doub 1.38 N Y
39 C16 H16 C H sing 1.08 N N
40 C17 C18 C C sing 1.38 N Y
41 C17 H17 C H sing 1.08 N N
42 C19 C18 C C doub 1.38 N Y
43 C20 C19 C C sing 1.38 N Y
44 C19 H19 C H sing 1.08 N N
45 C20 H20 C H sing 1.08 N N