Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 052    

Bonds between two atoms of the molecule

Total Number of Bonds: 75


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C3 O1 C O sing 1.43 N N
2 C3 C4 C C sing 1.53 N N
3 O1 C2 O C sing 1.43 N N
4 C2 C1 C C sing 1.53 N N
5 C4 N1 C N sing 1.47 N N
6 C1 N1 C N sing 1.47 N N
7 N1 C5 N C sing 1.47 N N
8 C5 C6 C C sing 1.53 N N
9 C6 N2 C N sing 1.47 N N
10 N2 C7 N C sing 1.38 N N
11 C7 C8 C C doub 1.37 N Y
12 C7 N4 C N sing 1.37 N Y
13 C8 C9 C C sing 1.4 N Y
14 N5 N4 N N sing 1.4 N Y
15 N5 C10 N C doub 1.31 N Y
16 N4 C12 N C sing 1.37 N Y
17 C9 O2 C O sing 1.35 N N
18 C9 N3 C N doub 1.32 N Y
19 O2 C16 O C sing 1.36 N N
20 C10 C11 C C sing 1.4 N Y
21 C12 N3 C N sing 1.34 N Y
22 C12 C11 C C doub 1.4 N Y
23 C11 C21 C C sing 1.48 N N
24 C16 C17 C C doub 1.39 N Y
25 C16 C15 C C sing 1.39 N Y
26 C17 C18 C C sing 1.38 N Y
27 C21 C20 C C doub 1.4 N Y
28 C21 C22 C C sing 1.4 N Y
29 C15 C14 C C doub 1.38 N Y
30 C18 C13 C C doub 1.38 N Y
31 C20 C19 C C sing 1.37 N Y
32 C22 C23 C C doub 1.36 N Y
33 C14 C13 C C sing 1.38 N Y
34 C19 C24 C C sing 1.51 N N
35 C19 C25 C C doub 1.4 N Y
36 C23 C25 C C sing 1.4 N Y
37 C25 C26 C C sing 1.47 N N
38 O3 C26 O C doub 1.22 N N
39 C26 N6 C N sing 1.35 N N
40 N6 C27 N C sing 1.47 N N
41 C27 C28 C C sing 1.53 N N
42 C27 C29 C C sing 1.53 N N
43 C28 C29 C C sing 1.53 N N
44 C13 H1 C H sing 1.08 N N
45 C14 H2 C H sing 1.08 N N
46 C17 H3 C H sing 1.08 N N
47 C18 H4 C H sing 1.08 N N
48 C22 H5 C H sing 1.08 N N
49 C23 H6 C H sing 1.08 N N
50 C24 H7 C H sing 1.09 N N
51 C24 H8 C H sing 1.09 N N
52 C24 H9 C H sing 1.09 N N
53 C28 H10 C H sing 1.09 N N
54 C28 H11 C H sing 1.09 N N
55 C29 H12 C H sing 1.09 N N
56 C29 H13 C H sing 1.09 N N
57 C1 H14 C H sing 1.09 N N
58 C1 H15 C H sing 1.09 N N
59 C2 H16 C H sing 1.09 N N
60 C2 H17 C H sing 1.09 N N
61 C3 H18 C H sing 1.09 N N
62 C3 H19 C H sing 1.09 N N
63 C4 H20 C H sing 1.09 N N
64 C4 H21 C H sing 1.09 N N
65 C5 H23 C H sing 1.09 N N
66 C5 H24 C H sing 1.09 N N
67 C6 H25 C H sing 1.09 N N
68 C6 H26 C H sing 1.09 N N
69 N2 H27 N H sing 0.97 N N
70 C8 H28 C H sing 1.08 N N
71 C10 H29 C H sing 1.08 N N
72 C15 H30 C H sing 1.08 N N
73 C20 H31 C H sing 1.08 N N
74 N6 H32 N H sing 0.97 N N
75 C27 H33 C H sing 1.09 N N