Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0Y0    

Bonds between two atoms of the molecule

Total Number of Bonds: 49


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OXT C O C doub 1.21 N N
2 C CA C C sing 1.51 N N
3 C O C O sing 1.34 N N
4 CA N C N sing 1.47 N N
5 CA CB C C sing 1.53 N N
6 CB CAS C C sing 1.53 N N
7 CAS NAR C N sing 1.47 N N
8 NAR CAF N C sing 1.47 N N
9 CAF CAA C C sing 1.53 N N
10 CAB CAA C C sing 1.54 N N
11 CAB OAH C O sing 1.43 N N
12 CAB CAC C C sing 1.55 N N
13 CAA OAE C O sing 1.44 N N
14 CAC OAI C O sing 1.43 N N
15 CAC CAD C C sing 1.55 N N
16 OAE CAD O C sing 1.44 N N
17 CAD N9 C N sing 1.47 N N
18 C8 N9 C N sing 1.36 N Y
19 C8 N7 C N doub 1.3 N Y
20 N9 C4 N C sing 1.37 N Y
21 N7 C5 N C sing 1.35 N Y
22 C4 N3 C N doub 1.33 N Y
23 C4 C5 C C sing 1.41 N Y
24 N3 C2 N C sing 1.32 N Y
25 C5 C6 C C doub 1.41 N Y
26 C2 N1 C N doub 1.32 N Y
27 C6 N1 C N sing 1.33 N Y
28 C6 N6 C N sing 1.38 N N
29 O H1 O H sing 0.97 N N
30 CA H2 C H sing 1.09 N N
31 N H3 N H sing 1.01 N N
32 N H4 N H sing 1.01 N N
33 CB H6 C H sing 1.09 N N
34 CB H7 C H sing 1.09 N N
35 CAS H8 C H sing 1.09 N N
36 CAS H9 C H sing 1.09 N N
37 NAR H10 N H sing 1.01 N N
38 CAF H12 C H sing 1.09 N N
39 CAF H13 C H sing 1.09 N N
40 CAA H14 C H sing 1.09 N N
41 CAB H15 C H sing 1.09 N N
42 OAH H16 O H sing 0.97 N N
43 CAC H17 C H sing 1.09 N N
44 OAI H18 O H sing 0.97 N N
45 CAD H19 C H sing 1.09 N N
46 C8 H20 C H sing 1.08 N N
47 C2 H21 C H sing 1.08 N N
48 N6 H22 N H sing 0.97 N N
49 N6 H23 N H sing 0.97 N N