Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0ZE    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 O1 C O doub 1.21 N N
2 C1 C2 C C sing 1.51 N N
3 C1 N C N sing 1.35 N N
4 C2 C3 C C sing 1.54 N N
5 C2 N1 C N sing 1.47 N N
6 C2 H2 C H sing 1.09 N N
7 C3 C4 C C sing 1.55 N N
8 C3 H31 C H sing 1.09 N N
9 C3 H32 C H sing 1.09 N N
10 C4 C5 C C sing 1.55 N N
11 C4 H41 C H sing 1.09 N N
12 C4 H42 C H sing 1.09 N N
13 C5 C6 C C sing 1.53 N N
14 C5 N1 C N sing 1.48 N N
15 C5 H5 C H sing 1.09 N N
16 C6 C7 C C sing 1.53 N N
17 C6 H61 C H sing 1.09 N N
18 C6 H62 C H sing 1.09 N N
19 C7 C8 C C sing 1.52 N N
20 C7 H71 C H sing 1.09 N N
21 C7 H72 C H sing 1.09 N N
22 C8 C9 C C sing 1.5 N N
23 C8 N2 C N sing 1.47 N N
24 C8 C10 C C sing 1.53 N N
25 C9 O2 C O doub 1.21 N N
26 C9 N1 C N sing 1.34 N N
27 N2 HN21 N H sing 1.01 N N
28 N2 HN22 N H sing 1.01 N N
29 C10 C11 C C sing 1.51 N N
30 C10 H101 C H sing 1.09 N N
31 C10 H102 C H sing 1.09 N N
32 C11 C12 C C doub 1.38 N Y
33 C11 C16 C C sing 1.38 N Y
34 C12 C13 C C sing 1.38 N Y
35 C12 H12 C H sing 1.08 N N
36 C13 C14 C C doub 1.38 N Y
37 C13 H13 C H sing 1.08 N N
38 C14 C15 C C sing 1.38 N Y
39 C14 H14 C H sing 1.08 N N
40 C15 C16 C C doub 1.38 N Y
41 C15 H15 C H sing 1.08 N N
42 C16 H16 C H sing 1.08 N N
43 N CA N C sing 1.47 N N
44 N H N H sing 0.97 N N
45 CA C C C sing 1.53 N N
46 CA CB C C sing 1.53 N N
47 CA HA C H sing 1.09 N N
48 C O C O sing 1.43 N N
49 C C17 C C sing 1.51 N N
50 CB CG C C sing 1.53 N N
51 CB HB2 C H sing 1.09 N N
52 CB HB3 C H sing 1.09 N N
53 CG CD C C sing 1.53 N N
54 CG HG2 C H sing 1.09 N N
55 CG HG3 C H sing 1.09 N N
56 CD NE C N sing 1.47 N N
57 CD HD2 C H sing 1.09 N N
58 CD HD3 C H sing 1.09 N N
59 NE CZ N C sing 1.37 N N
60 NE HE N H sing 0.97 N N
61 CZ NH1 C N sing 1.33 N N
62 CZ NH2 C N doub 1.33 N N
63 NH1 HH11 N H sing 0.97 N N
64 NH1 HH12 N H sing 0.97 N N
65 NH2 HH21 N H sing 0.97 N N
66 NH2 HH22 N H sing 0.97 N N
67 C17 N11 C N doub 1.28 N Y
68 C17 S1 C S sing 1.71 N Y
69 N11 C21 N C sing 1.35 N Y
70 C21 C31 C C doub 1.41 N Y
71 C21 C71 C C sing 1.4 N Y
72 C31 C41 C C sing 1.36 N Y
73 C31 H3 C H sing 1.08 N N
74 C41 C51 C C doub 1.39 N Y
75 C41 H4 C H sing 1.08 N N
76 C51 C61 C C sing 1.38 N Y
77 C51 H51 C H sing 1.08 N N
78 C61 C71 C C doub 1.39 N Y
79 C61 H6 C H sing 1.08 N N
80 C71 S1 C S sing 1.76 N Y
81 C H37 C H sing 1.09 N N
82 O H38 O H sing 0.97 N N