Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
140
Bonds between two atoms of the molecule
Total Number of Bonds: 56
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
C1
O1
C
O
doub
1.21
N
N
2
C1
O2
C
O
sing
1.34
N
N
3
C1
C2
C
C
sing
1.51
N
N
4
O2
HO2
O
H
sing
0.97
N
N
5
C2
N
C
N
sing
1.46
N
N
6
C2
H21
C
H
sing
1.09
N
N
7
C2
H22
C
H
sing
1.09
N
N
8
N
C3
N
C
sing
1.35
N
N
9
N
HN
N
H
sing
0.97
N
N
10
C3
O3
C
O
doub
1.21
N
N
11
C3
C4
C
C
sing
1.51
N
N
12
C4
C5
C
C
sing
1.53
N
N
13
C4
H41
C
H
sing
1.09
N
N
14
C4
H42
C
H
sing
1.09
N
N
15
C5
C6
C
C
sing
1.53
N
N
16
C5
H51
C
H
sing
1.09
N
N
17
C5
H52
C
H
sing
1.09
N
N
18
C6
C7
C
C
sing
1.53
N
N
19
C6
H61
C
H
sing
1.09
N
N
20
C6
H62
C
H
sing
1.09
N
N
21
C7
C8
C
C
sing
1.53
N
N
22
C7
H71
C
H
sing
1.09
N
N
23
C7
H72
C
H
sing
1.09
N
N
24
C8
C9
C
C
sing
1.53
N
N
25
C8
H81
C
H
sing
1.09
N
N
26
C8
H82
C
H
sing
1.09
N
N
27
C9
C10
C
C
sing
1.53
N
N
28
C9
H91
C
H
sing
1.09
N
N
29
C9
H92
C
H
sing
1.09
N
N
30
C10
C11
C
C
sing
1.53
N
N
31
C10
H101
C
H
sing
1.09
N
N
32
C10
H102
C
H
sing
1.09
N
N
33
C11
C12
C
C
sing
1.53
N
N
34
C11
H111
C
H
sing
1.09
N
N
35
C11
H112
C
H
sing
1.09
N
N
36
C12
C13
C
C
sing
1.53
N
N
37
C12
H121
C
H
sing
1.09
N
N
38
C12
H122
C
H
sing
1.09
N
N
39
C13
C14
C
C
sing
1.53
N
N
40
C13
H131
C
H
sing
1.09
N
N
41
C13
H132
C
H
sing
1.09
N
N
42
C14
C15
C
C
sing
1.53
N
N
43
C14
H141
C
H
sing
1.09
N
N
44
C14
H142
C
H
sing
1.09
N
N
45
C15
C16
C
C
sing
1.53
N
N
46
C15
H151
C
H
sing
1.09
N
N
47
C15
H152
C
H
sing
1.09
N
N
48
C16
C17
C
C
sing
1.53
N
N
49
C16
H161
C
H
sing
1.09
N
N
50
C16
H162
C
H
sing
1.09
N
N
51
C17
C18
C
C
sing
1.53
N
N
52
C17
H171
C
H
sing
1.09
N
N
53
C17
H172
C
H
sing
1.09
N
N
54
C18
H181
C
H
sing
1.09
N
N
55
C18
H182
C
H
sing
1.09
N
N
56
C18
H183
C
H
sing
1.09
N
N