Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 1RR    

Bonds between two atoms of the molecule

Total Number of Bonds: 101


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O8 C5 O C doub 1.21 N N
2 O9 C5 O C sing 1.34 N N
3 C50 C47 C C doub 1.38 N Y
4 C50 C48 C C sing 1.38 N Y
5 C5 C1 C C sing 1.51 N N
6 C47 C44 C C sing 1.38 N Y
7 C48 C45 C C doub 1.38 N Y
8 C44 C39 C C doub 1.39 N Y
9 C45 C39 C C sing 1.39 N Y
10 C39 C34 C C sing 1.48 N N
11 C1 C3 C C sing 1.53 N N
12 C1 N4 C N sing 1.47 N N
13 C1 C2 C C sing 1.53 N N
14 C3 C2 C C sing 1.53 N N
15 N4 C7 N C sing 1.35 N N
16 C34 N36 C N doub 1.32 N Y
17 C34 C29 C C sing 1.4 N Y
18 C6 C2 C C sing 1.51 N N
19 C6 C10 C C doub 1.31 N N
20 C7 O12 C O doub 1.21 N N
21 C7 C11 C C sing 1.51 N N
22 N36 C32 N C sing 1.34 N Y
23 C14 C11 C C sing 1.55 N N
24 C14 C17 C C sing 1.55 N N
25 C29 C23 C C doub 1.38 N Y
26 C11 N13 C N sing 1.47 N N
27 C32 C37 C C sing 1.4 N Y
28 C32 C28 C C doub 1.42 N Y
29 C23 C28 C C sing 1.41 N Y
30 C23 O20 C O sing 1.36 N N
31 C17 O20 C O sing 1.43 N N
32 C17 C15 C C sing 1.55 N N
33 C37 C43 C C doub 1.38 N Y
34 C28 C33 C C sing 1.4 N Y
35 N13 C15 N C sing 1.47 N N
36 N13 C16 N C sing 1.35 N N
37 C43 C38 C C sing 1.4 N Y
38 C43 O46 C O sing 1.36 N N
39 C33 C38 C C doub 1.36 N Y
40 C49 O46 C O sing 1.43 N N
41 O19 C16 O C doub 1.21 N N
42 C16 C18 C C sing 1.51 N N
43 C25 C22 C C sing 1.53 N N
44 C18 C22 C C sing 1.53 N N
45 C18 N21 C N sing 1.47 N N
46 C27 C22 C C sing 1.53 N N
47 C22 C26 C C sing 1.53 N N
48 N21 C24 N C sing 1.35 N N
49 O31 C24 O C doub 1.22 N N
50 C24 N30 C N sing 1.35 N N
51 C40 C35 C C sing 1.53 N N
52 N30 C35 N C sing 1.47 N N
53 C35 C41 C C sing 1.53 N N
54 C35 C42 C C sing 1.53 N N
55 C6 H1 C H sing 1.08 N N
56 C10 H2 C H sing 1.08 N N
57 C10 H3 C H sing 1.08 N N
58 C15 H4 C H sing 1.09 N N
59 C15 H5 C H sing 1.09 N N
60 C17 H6 C H sing 1.09 N N
61 C26 H7 C H sing 1.09 N N
62 C26 H8 C H sing 1.09 N N
63 C26 H9 C H sing 1.09 N N
64 C2 H10 C H sing 1.09 N N
65 C3 H11 C H sing 1.09 N N
66 C3 H12 C H sing 1.09 N N
67 N4 H13 N H sing 0.97 N N
68 O9 H14 O H sing 0.97 N N
69 C11 H15 C H sing 1.09 N N
70 C14 H16 C H sing 1.09 N N
71 C14 H17 C H sing 1.09 N N
72 C18 H18 C H sing 1.09 N N
73 N21 H19 N H sing 0.97 N N
74 C25 H20 C H sing 1.09 N N
75 C25 H21 C H sing 1.09 N N
76 C25 H22 C H sing 1.09 N N
77 C27 H23 C H sing 1.09 N N
78 C27 H24 C H sing 1.09 N N
79 C27 H25 C H sing 1.09 N N
80 C29 H26 C H sing 1.08 N N
81 N30 H27 N H sing 0.97 N N
82 C33 H28 C H sing 1.08 N N
83 C37 H29 C H sing 1.08 N N
84 C38 H30 C H sing 1.08 N N
85 C40 H31 C H sing 1.09 N N
86 C40 H32 C H sing 1.09 N N
87 C40 H33 C H sing 1.09 N N
88 C41 H34 C H sing 1.09 N N
89 C41 H35 C H sing 1.09 N N
90 C41 H36 C H sing 1.09 N N
91 C42 H37 C H sing 1.09 N N
92 C42 H38 C H sing 1.09 N N
93 C42 H39 C H sing 1.09 N N
94 C44 H40 C H sing 1.08 N N
95 C45 H41 C H sing 1.08 N N
96 C47 H42 C H sing 1.08 N N
97 C48 H43 C H sing 1.08 N N
98 C49 H44 C H sing 1.09 N N
99 C49 H45 C H sing 1.09 N N
100 C49 H46 C H sing 1.09 N N
101 C50 H47 C H sing 1.08 N N