Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
1YE
Bonds between two atoms of the molecule
Total Number of Bonds: 37
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
CAG
CAF
C
C
doub
1.39
N
Y
2
CAG
CAP
C
C
sing
1.38
N
Y
3
CAK
CAM
C
C
sing
1.51
N
N
4
CAK
CAP
C
C
sing
1.51
N
N
5
CAF
CAI
C
C
sing
1.38
N
Y
6
CAM
OAC
C
O
doub
1.21
N
N
7
CAM
OAE
C
O
sing
1.34
N
N
8
CAP
CAU
C
C
doub
1.39
N
Y
9
CAI
CAR
C
C
doub
1.39
N
Y
10
CAU
CAR
C
C
sing
1.41
N
Y
11
CAU
OAL
C
O
sing
1.35
N
N
12
CAR
CAQ
C
C
sing
1.48
N
N
13
OAL
CAT
O
C
sing
1.35
N
N
14
CAQ
OAD
C
O
doub
1.22
N
N
15
CAQ
CAS
C
C
sing
1.48
N
N
16
CAT
CAS
C
C
doub
1.4
N
Y
17
CAT
CAO
C
C
sing
1.39
N
Y
18
CAB
CAO
C
C
sing
1.51
N
N
19
CAS
CAJ
C
C
sing
1.39
N
Y
20
CAO
CAN
C
C
doub
1.38
N
Y
21
CAJ
CAH
C
C
doub
1.38
N
Y
22
CAN
CAH
C
C
sing
1.39
N
Y
23
CAN
CAA
C
C
sing
1.51
N
N
24
CAJ
H1
C
H
sing
1.08
N
N
25
CAH
H2
C
H
sing
1.08
N
N
26
CAA
H3
C
H
sing
1.09
N
N
27
CAA
H4
C
H
sing
1.09
N
N
28
CAA
H5
C
H
sing
1.09
N
N
29
CAB
H6
C
H
sing
1.09
N
N
30
CAB
H7
C
H
sing
1.09
N
N
31
CAB
H8
C
H
sing
1.09
N
N
32
CAI
H9
C
H
sing
1.08
N
N
33
CAF
H10
C
H
sing
1.08
N
N
34
CAG
H11
C
H
sing
1.08
N
N
35
CAK
H12
C
H
sing
1.09
N
N
36
CAK
H13
C
H
sing
1.09
N
N
37
OAE
H14
O
H
sing
0.97
N
N