Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 227    

Bonds between two atoms of the molecule

Total Number of Bonds: 67


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C34 N33 C N sing 1.46 N N
2 C34 H341 C H sing 1.09 N N
3 C34 H342 C H sing 1.09 N N
4 C34 H343 C H sing 1.09 N N
5 C32 N33 C N sing 1.47 N N
6 C32 C30 C C sing 1.53 N N
7 C32 H321 C H sing 1.1 N N
8 C32 H322 C H sing 1.1 N N
9 C4 C9 C C doub 1.39 N Y
10 C4 C1 C C sing 1.41 N Y
11 C4 H4 C H sing 1.09 N N
12 C7 C13 C C doub 1.4 N Y
13 C7 C3 C C sing 1.39 N Y
14 C7 H7 C H sing 1.09 N N
15 C9 O14 C O sing 1.36 N N
16 C9 C13 C C sing 1.39 N Y
17 C13 O17 C O sing 1.36 N N
18 C20 C15 C C sing 1.41 N Y
19 C20 C24 C C doub 1.4 N Y
20 C20 C16 C C sing 1.51 N N
21 C21 O17 C O sing 1.43 N N
22 C21 H211 C H sing 1.09 N N
23 C21 H212 C H sing 1.09 N N
24 C21 H213 C H sing 1.09 N N
25 N5 C10 N C sing 1.47 N N
26 N5 C2 N C sing 1.39 N N
27 N5 C11 N C sing 1.47 N N
28 C18 O14 C O sing 1.43 N N
29 C18 H181 C H sing 1.09 N N
30 C18 H182 C H sing 1.09 N N
31 C18 H183 C H sing 1.09 N N
32 C16 C11 C C sing 1.53 N N
33 C16 H161 C H sing 1.1 N N
34 C16 H162 C H sing 1.1 N N
35 C19 S22 C S sing 1.76 N N
36 C19 C23 C C sing 1.39 N Y
37 C19 C15 C C doub 1.4 N Y
38 O26 S22 O S doub 1.45 N N
39 S22 N25 S N sing 1.71 N N
40 S22 O27 S O doub 1.45 N N
41 N25 C30 N C sing 1.49 N N
42 N25 C29 N C sing 1.49 N N
43 C30 H301 C H sing 1.1 N N
44 C30 H302 C H sing 1.1 N N
45 N33 C31 N C sing 1.47 N N
46 C31 C29 C C sing 1.53 N N
47 C31 H311 C H sing 1.1 N N
48 C31 H312 C H sing 1.1 N N
49 C29 H291 C H sing 1.1 N N
50 C29 H292 C H sing 1.1 N N
51 C23 C28 C C doub 1.39 N Y
52 C23 H23 C H sing 1.09 N N
53 C28 C24 C C sing 1.39 N Y
54 C28 H28 C H sing 1.09 N N
55 C15 C10 C C sing 1.51 N N
56 C10 H101 C H sing 1.1 N N
57 C10 H102 C H sing 1.1 N N
58 C24 H24 C H sing 1.09 N N
59 C11 H111 C H sing 1.1 N N
60 C11 H112 C H sing 1.1 N N
61 C2 C1 C C doub 1.42 N Y
62 C2 N6 C N sing 1.37 N Y
63 C1 C3 C C sing 1.4 N Y
64 N6 C12 N C doub 1.34 N Y
65 C12 N8 C N sing 1.35 N Y
66 C12 H12 C H sing 1.08 N N
67 N8 C3 N C doub 1.34 N Y