Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 26W    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3' C3' O C sing 1.43 N N
2 O4' C4' O C sing 1.43 N N
3 C3' C4' C C sing 1.53 N N
4 C3' C2' C C sing 1.53 N N
5 C4' C5' C C sing 1.53 N N
6 O2' C2' O C sing 1.43 N N
7 C2' C1' C C sing 1.53 N N
8 O6' C6' O C sing 1.43 N N
9 C5' C6' C C sing 1.53 N N
10 C5' O5' C O sing 1.43 N N
11 C1' O5' C O sing 1.43 N N
12 C1' N1 C N sing 1.46 N N
13 N1 C2 N C sing 1.35 N N
14 C2 O3 C O doub 1.21 N N
15 C2 C4 C C sing 1.51 N N
16 C4 C5 C C sing 1.53 N N
17 C6 C5 C C sing 1.53 N N
18 C5 C7 C C sing 1.51 N N
19 C8 C7 C C doub 1.38 N Y
20 C8 C9 C C sing 1.38 N Y
21 C7 C12 C C sing 1.38 N Y
22 C9 C10 C C doub 1.38 N Y
23 C12 C11 C C doub 1.38 N Y
24 C10 C11 C C sing 1.38 N Y
25 C10 C13 C C sing 1.51 N N
26 C13 C14 C C sing 1.53 N N
27 C14 H1 C H sing 1.09 N N
28 C14 H2 C H sing 1.09 N N
29 C14 H3 C H sing 1.09 N N
30 C13 H4 C H sing 1.09 N N
31 C13 H5 C H sing 1.09 N N
32 C11 H6 C H sing 1.08 N N
33 C12 H7 C H sing 1.08 N N
34 C9 H8 C H sing 1.08 N N
35 C8 H9 C H sing 1.08 N N
36 C5 H10 C H sing 1.09 N N
37 C6 H11 C H sing 1.09 N N
38 C6 H12 C H sing 1.09 N N
39 C6 H13 C H sing 1.09 N N
40 C4 H14 C H sing 1.09 N N
41 C4 H15 C H sing 1.09 N N
42 N1 H16 N H sing 0.97 N N
43 C1' H17 C H sing 1.09 N N
44 C5' H18 C H sing 1.09 N N
45 C6' H19 C H sing 1.09 N N
46 C6' H20 C H sing 1.09 N N
47 O6' H21 O H sing 0.97 N N
48 C4' H22 C H sing 1.09 N N
49 O4' H23 O H sing 0.97 N N
50 C3' H24 C H sing 1.09 N N
51 O3' H25 O H sing 0.97 N N
52 C2' H26 C H sing 1.09 N N
53 O2' H27 O H sing 0.97 N N