Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 38W    

Bonds between two atoms of the molecule

Total Number of Bonds: 54


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C13 C12 C C doub 1.36 N Y
2 C13 C14 C C sing 1.39 N Y
3 C12 C11 C C sing 1.4 N Y
4 N08 N07 N N sing 1.29 N Y
5 N08 C09 N C doub 1.31 N Y
6 N15 C14 N C sing 1.38 N Y
7 N15 C16 N C sing 1.36 N Y
8 C14 C27 C C doub 1.41 N Y
9 N07 C06 N C doub 1.31 N Y
10 C11 C09 C C sing 1.48 N N
11 C11 C28 C C doub 1.39 N Y
12 C09 O10 C O sing 1.35 N Y
13 C16 C17 C C doub 1.36 N Y
14 C27 C28 C C sing 1.39 N Y
15 C27 C17 C C sing 1.47 N Y
16 C06 O10 C O sing 1.35 N Y
17 C06 N05 C N sing 1.38 N N
18 C17 C18 C C sing 1.48 N N
19 N05 C02 N C sing 1.46 N N
20 C18 N19 C N doub 1.33 N Y
21 C18 N23 C N sing 1.33 N Y
22 N19 C20 N C sing 1.32 N Y
23 C02 C03 C C sing 1.53 N N
24 C02 C04 C C sing 1.53 N N
25 C02 C01 C C sing 1.53 N N
26 N23 C22 N C doub 1.32 N Y
27 C20 C21 C C doub 1.39 N Y
28 C22 C21 C C sing 1.39 N Y
29 C22 C24 C C sing 1.51 N N
30 C26 C25 C C sing 1.53 N N
31 C26 C24 C C sing 1.53 N N
32 C25 C24 C C sing 1.53 N N
33 C01 H1 C H sing 1.09 N N
34 C01 H2 C H sing 1.09 N N
35 C01 H3 C H sing 1.09 N N
36 C03 H4 C H sing 1.09 N N
37 C03 H5 C H sing 1.09 N N
38 C03 H6 C H sing 1.09 N N
39 C04 H7 C H sing 1.09 N N
40 C04 H8 C H sing 1.09 N N
41 C04 H9 C H sing 1.09 N N
42 N05 H10 N H sing 0.97 N N
43 C12 H11 C H sing 1.08 N N
44 C13 H12 C H sing 1.08 N N
45 N15 H13 N H sing 0.97 N N
46 C16 H14 C H sing 1.08 N N
47 C20 H15 C H sing 1.08 N N
48 C21 H16 C H sing 1.08 N N
49 C24 H17 C H sing 1.09 N N
50 C25 H18 C H sing 1.09 N N
51 C25 H19 C H sing 1.09 N N
52 C26 H20 C H sing 1.09 N N
53 C26 H21 C H sing 1.09 N N
54 C28 H22 C H sing 1.08 N N