Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 3AJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 89


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C3 C C sing 1.53 N N
2 C2 C1 C C sing 1.54 N N
3 C35 C34 C C sing 1.53 N N
4 C3 C4 C C sing 1.52 N N
5 C1 C6 C C sing 1.51 N N
6 C30 C28 C C sing 1.53 N N
7 C30 C31 C C sing 1.53 N N
8 C17 C18 C C sing 1.53 N N
9 C17 C16 C C sing 1.52 N N
10 C10 C6 C C sing 1.53 N N
11 C27 C28 C C sing 1.53 N N
12 C27 O25 C O sing 1.43 N N
13 C28 C31 C C sing 1.53 N N
14 C28 C29 C C sing 1.47 N N
15 C15 C16 C C doub 1.35 Z N
16 C15 C14 C C sing 1.46 N N
17 C18 O24 C O sing 1.43 N N
18 C18 C19 C C sing 1.53 N N
19 C16 C21 C C sing 1.48 N N
20 C6 C5 C C sing 1.55 N N
21 C6 C9 C C sing 1.52 N N
22 C34 C36 C C sing 1.53 N N
23 C34 C33 C C sing 1.53 N N
24 C34 O37 C O sing 1.43 N N
25 C4 C14 C C doub 1.33 E N
26 C4 C5 C C sing 1.5 N N
27 C13 C33 C C sing 1.53 N N
28 C13 C12 C C sing 1.53 N N
29 O25 C19 O C sing 1.43 N N
30 C12 C11 C C sing 1.53 N N
31 C11 C9 C C sing 1.53 N N
32 C11 C26 C C sing 1.53 N N
33 C5 C7 C C sing 1.53 N N
34 C19 C20 C C sing 1.53 N N
35 C29 N32 C N trip 1.14 N N
36 C9 C8 C C sing 1.55 N N
37 C21 C22 C C doub 1.33 N N
38 C21 C20 C C sing 1.52 N N
39 C20 O23 C O sing 1.43 N N
40 C7 C8 C C sing 1.55 N N
41 C31 H1 C H sing 1.09 N N
42 C31 H2 C H sing 1.09 N N
43 C30 H3 C H sing 1.09 N N
44 C30 H4 C H sing 1.09 N N
45 C27 H5 C H sing 1.09 N N
46 C27 H6 C H sing 1.09 N N
47 C19 H7 C H sing 1.09 N N
48 C18 H8 C H sing 1.09 N N
49 O24 H9 O H sing 0.97 N N
50 C17 H10 C H sing 1.09 N N
51 C17 H11 C H sing 1.09 N N
52 C20 H12 C H sing 1.09 N N
53 O23 H13 O H sing 0.97 N N
54 C22 H14 C H sing 1.08 N N
55 C22 H15 C H sing 1.08 N N
56 C15 H16 C H sing 1.08 N N
57 C14 H17 C H sing 1.08 N N
58 C3 H18 C H sing 1.09 N N
59 C3 H19 C H sing 1.09 N N
60 C2 H20 C H sing 1.09 N N
61 C2 H21 C H sing 1.09 N N
62 C5 H22 C H sing 1.09 N N
63 C7 H23 C H sing 1.09 N N
64 C7 H24 C H sing 1.09 N N
65 C8 H25 C H sing 1.09 N N
66 C8 H26 C H sing 1.09 N N
67 C9 H27 C H sing 1.09 N N
68 C10 H28 C H sing 1.09 N N
69 C10 H29 C H sing 1.09 N N
70 C10 H30 C H sing 1.09 N N
71 C1 H31 C H sing 1.09 N N
72 C1 H32 C H sing 1.09 N N
73 C11 H33 C H sing 1.09 N N
74 C26 H34 C H sing 1.09 N N
75 C26 H35 C H sing 1.09 N N
76 C26 H36 C H sing 1.09 N N
77 C12 H37 C H sing 1.09 N N
78 C12 H38 C H sing 1.09 N N
79 C13 H39 C H sing 1.09 N N
80 C13 H40 C H sing 1.09 N N
81 C33 H41 C H sing 1.09 N N
82 C33 H42 C H sing 1.09 N N
83 O37 H43 O H sing 0.97 N N
84 C36 H44 C H sing 1.09 N N
85 C36 H45 C H sing 1.09 N N
86 C36 H46 C H sing 1.09 N N
87 C35 H47 C H sing 1.09 N N
88 C35 H48 C H sing 1.09 N N
89 C35 H49 C H sing 1.09 N N