Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 3DZ    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAN PAM O P doub 1.48 N N
2 CAE CAF C C sing 1.51 N N
3 CAE CAD C C sing 1.53 N N
4 CAP PAM C P sing 1.82 N N
5 CAP NAQ C N sing 1.47 N N
6 CAP CAR C C sing 1.53 N N
7 CAL PAM C P sing 1.82 N N
8 CAL CAD C C sing 1.53 N N
9 PAM OAO P O sing 1.61 N N
10 CAU CAV C C doub 1.38 N Y
11 CAU CAT C C sing 1.38 N Y
12 CAV CAW C C sing 1.38 N Y
13 CAF CAK C C doub 1.38 N Y
14 CAF CAG C C sing 1.38 N Y
15 CAK CAJ C C sing 1.38 N Y
16 CAG CAH C C doub 1.38 N Y
17 CAJ CAI C C doub 1.38 N Y
18 CAH CAI C C sing 1.38 N Y
19 CAH CAZ C C sing 1.51 N N
20 CAD CAB C C sing 1.51 N N
21 CAZ NBA C N sing 1.47 N N
22 CAS CAR C C sing 1.53 N N
23 CAS CAT C C sing 1.51 N N
24 CAT CAY C C doub 1.38 N Y
25 CAW CAX C C doub 1.38 N Y
26 OAA CAB O C doub 1.21 N N
27 CAB OAC C O sing 1.34 N N
28 CAX CAY C C sing 1.38 N Y
29 OAC H1 O H sing 0.97 N N
30 CAD H2 C H sing 1.09 N N
31 CAE H3 C H sing 1.09 N N
32 CAE H4 C H sing 1.09 N N
33 CAK H5 C H sing 1.08 N N
34 CAJ H6 C H sing 1.08 N N
35 CAI H7 C H sing 1.08 N N
36 CAZ H8 C H sing 1.09 N N
37 CAZ H9 C H sing 1.09 N N
38 NBA H10 N H sing 1.01 N N
39 NBA H11 N H sing 1.01 N N
40 CAG H13 C H sing 1.08 N N
41 CAL H14 C H sing 1.09 N N
42 CAL H15 C H sing 1.09 N N
43 OAO H16 O H sing 0.97 N N
44 CAP H17 C H sing 1.09 N N
45 NAQ H18 N H sing 1.01 N N
46 NAQ H19 N H sing 1.01 N N
47 CAR H21 C H sing 1.09 N N
48 CAR H22 C H sing 1.09 N N
49 CAS H23 C H sing 1.09 N N
50 CAS H24 C H sing 1.09 N N
51 CAU H25 C H sing 1.08 N N
52 CAY H26 C H sing 1.08 N N
53 CAX H27 C H sing 1.08 N N
54 CAW H28 C H sing 1.08 N N
55 CAV H29 C H sing 1.08 N N