Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 3KS    

Bonds between two atoms of the molecule

Total Number of Bonds: 57


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O7 C2 O C doub 1.21 N N
2 N2 C13 N C sing 1.47 N N
3 O8 C15 O C doub 1.21 N N
4 C13 C12 C C sing 1.53 N N
5 C13 C14 C C sing 1.51 N N
6 C12 C11 C C sing 1.53 N N
7 C2 N C N sing 1.35 N N
8 C2 C1 C C sing 1.51 N N
9 O3 C9 O C doub 1.21 N N
10 C C1 C C sing 1.53 N N
11 C10 C11 C C sing 1.53 N N
12 C10 C8 C C sing 1.53 N N
13 C15 C16 C C sing 1.51 N N
14 C15 N3 C N sing 1.35 N N
15 N C3 N C sing 1.47 N N
16 N1 C8 N C sing 1.46 N N
17 N1 C7 N C sing 1.35 N N
18 C1 N3 C N sing 1.46 N N
19 C9 C8 C C sing 1.51 N N
20 C9 O2 C O sing 1.34 N N
21 C14 O5 C O doub 1.21 N N
22 C14 O4 C O sing 1.34 N N
23 C6 C7 C C sing 1.51 N N
24 C6 C5 C C sing 1.53 N N
25 C7 O6 C O doub 1.21 N N
26 O1 C4 O C doub 1.21 N N
27 C3 C5 C C sing 1.53 N N
28 C3 C4 C C sing 1.51 N N
29 C4 O C O sing 1.34 N N
30 C16 H163 C H sing 1.09 N N
31 C16 H162 C H sing 1.09 N N
32 C16 H161 C H sing 1.09 N N
33 N3 H31 N H sing 0.97 N N
34 C1 H11 C H sing 1.09 N N
35 C HC1 C H sing 1.09 N N
36 C HC2 C H sing 1.09 N N
37 C HC3 C H sing 1.09 N N
38 N HN1 N H sing 0.97 N N
39 C3 H32 C H sing 1.09 N N
40 O H1 O H sing 0.97 N N
41 C5 H51 C H sing 1.09 N N
42 C5 H52 C H sing 1.09 N N
43 C6 H62 C H sing 1.09 N N
44 C6 H61 C H sing 1.09 N N
45 N1 H12 N H sing 0.97 N N
46 C8 H81 C H sing 1.09 N N
47 O2 H2 O H sing 0.97 N N
48 C10 H101 C H sing 1.09 N N
49 C10 H102 C H sing 1.09 N N
50 C11 H111 C H sing 1.09 N N
51 C11 H112 C H sing 1.09 N N
52 C12 H121 C H sing 1.09 N N
53 C12 H122 C H sing 1.09 N N
54 C13 H131 C H sing 1.09 N N
55 N2 H22 N H sing 1.01 N N
56 N2 H21 N H sing 1.01 N N
57 O4 H4 O H sing 0.97 N N