Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
3O1
Bonds between two atoms of the molecule
Total Number of Bonds: 47
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
CAA
CAV
C
C
sing
1.53
N
N
2
CAB
CAV
C
C
sing
1.53
N
N
3
CAM
CAO
C
C
sing
1.53
N
N
4
CAM
CAL
C
C
sing
1.53
N
N
5
OAQ
CAO
O
C
sing
1.43
N
N
6
OAQ
CAT
O
C
sing
1.36
N
N
7
CAV
CAC
C
C
sing
1.53
N
N
8
CAV
OAR
C
O
sing
1.45
N
N
9
CAN
CAL
C
C
sing
1.53
N
N
10
CAN
NAP
C
N
sing
1.46
N
N
11
OAE
CAS
O
C
doub
1.22
N
N
12
CAS
OAR
C
O
sing
1.35
N
N
13
CAS
NAP
C
N
sing
1.35
N
N
14
CAT
CAI
C
C
doub
1.39
N
Y
15
CAT
CAH
C
C
sing
1.39
N
Y
16
CAI
CAK
C
C
sing
1.38
N
Y
17
CAH
CAJ
C
C
doub
1.38
N
Y
18
CAK
CAU
C
C
doub
1.38
N
Y
19
CAJ
CAU
C
C
sing
1.38
N
Y
20
CAU
SAW
C
S
sing
1.76
N
N
21
NAD
SAW
N
S
sing
1.66
N
N
22
SAW
OAG
S
O
doub
1.42
N
N
23
SAW
OAF
S
O
doub
1.42
N
N
24
CAA
H1
C
H
sing
1.09
N
N
25
CAA
H2
C
H
sing
1.09
N
N
26
CAA
H3
C
H
sing
1.09
N
N
27
CAB
H4
C
H
sing
1.09
N
N
28
CAB
H5
C
H
sing
1.09
N
N
29
CAB
H6
C
H
sing
1.09
N
N
30
CAC
H7
C
H
sing
1.09
N
N
31
CAC
H8
C
H
sing
1.09
N
N
32
CAC
H9
C
H
sing
1.09
N
N
33
NAP
H10
N
H
sing
0.97
N
N
34
CAN
H11
C
H
sing
1.09
N
N
35
CAN
H12
C
H
sing
1.09
N
N
36
CAL
H13
C
H
sing
1.09
N
N
37
CAM
H14
C
H
sing
1.09
N
N
38
CAO
H15
C
H
sing
1.09
N
N
39
CAO
H16
C
H
sing
1.09
N
N
40
CAH
H17
C
H
sing
1.08
N
N
41
CAJ
H18
C
H
sing
1.08
N
N
42
NAD
H19
N
H
sing
0.97
N
N
43
NAD
H20
N
H
sing
0.97
N
N
44
CAK
H21
C
H
sing
1.08
N
N
45
CAI
H22
C
H
sing
1.08
N
N
46
CAL
H23
C
H
sing
1.09
N
N
47
CAM
H24
C
H
sing
1.09
N
N