Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
3SZ
Bonds between two atoms of the molecule
Total Number of Bonds: 56
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
NAA
CAV
N
C
sing
1.4
N
N
2
OAB
SBC
O
S
doub
1.42
N
N
3
OAC
SBC
O
S
doub
1.42
N
N
4
OAD
SBD
O
S
doub
1.42
N
N
5
OAE
SBD
O
S
doub
1.42
N
N
6
CAF
CAG
C
C
doub
1.38
N
Y
7
CAF
CAH
C
C
sing
1.38
N
Y
8
CAG
CAV
C
C
sing
1.39
N
Y
9
CAH
CAW
C
C
doub
1.38
N
Y
10
CAI
CAJ
C
C
doub
1.38
N
Y
11
CAI
CAX
C
C
sing
1.38
N
Y
12
CAJ
CAY
C
C
sing
1.39
N
Y
13
CAK
CAV
C
C
doub
1.39
N
Y
14
CAK
CAW
C
C
sing
1.38
N
Y
15
CAL
CAX
C
C
doub
1.38
N
Y
16
CAL
CAZ
C
C
sing
1.39
N
Y
17
CAM
CAP
C
C
sing
1.47
N
N
18
CAM
CAQ
C
C
sing
1.54
N
N
19
CAN
CAO
C
C
sing
1.53
N
N
20
CAN
OAT
C
O
sing
1.43
N
N
21
CAO
OAU
C
O
sing
1.43
N
N
22
CAP
NBA
C
N
sing
1.48
N
N
23
CAQ
NBB
C
N
sing
1.43
N
N
24
CAR
CAS
C
C
sing
1.55
N
N
25
CAR
NBA
C
N
sing
1.44
N
N
26
CAS
NBB
C
N
sing
1.49
N
N
27
OAT
CAY
O
C
sing
1.36
N
N
28
OAU
CAZ
O
C
sing
1.36
N
N
29
CAW
SBC
C
S
sing
1.76
N
N
30
CAX
SBD
C
S
sing
1.76
N
N
31
CAY
CAZ
C
C
doub
1.39
N
Y
32
NBA
SBC
N
S
sing
1.66
N
N
33
NBB
SBD
N
S
sing
1.66
N
N
34
NAA
HNAA
N
H
sing
0.97
N
N
35
NAA
HNAB
N
H
sing
0.97
N
N
36
CAF
HAF
C
H
sing
1.08
N
N
37
CAG
HAG
C
H
sing
1.08
N
N
38
CAH
HAH
C
H
sing
1.08
N
N
39
CAI
HAI
C
H
sing
1.08
N
N
40
CAJ
HAJ
C
H
sing
1.08
N
N
41
CAK
HAK
C
H
sing
1.08
N
N
42
CAL
HAL
C
H
sing
1.08
N
N
43
CAM
HAM
C
H
sing
1.09
N
N
44
CAM
HAMA
C
H
sing
1.09
N
N
45
CAN
HAN
C
H
sing
1.09
N
N
46
CAN
HANA
C
H
sing
1.09
N
N
47
CAO
HAO
C
H
sing
1.09
N
N
48
CAO
HAOA
C
H
sing
1.09
N
N
49
CAP
HAP
C
H
sing
1.09
N
N
50
CAP
HAPA
C
H
sing
1.09
N
N
51
CAQ
HAQ
C
H
sing
1.09
N
N
52
CAQ
HAQA
C
H
sing
1.09
N
N
53
CAR
HAR
C
H
sing
1.09
N
N
54
CAR
HARA
C
H
sing
1.09
N
N
55
CAS
HAS
C
H
sing
1.09
N
N
56
CAS
HASA
C
H
sing
1.09
N
N