Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 3UC    

Bonds between two atoms of the molecule

Total Number of Bonds: 60


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O6' C6' O C sing 1.43 N N
2 C6' C5' C C sing 1.53 N N
3 O4 C4 O C doub 1.22 N N
4 C4' O4' C O sing 1.43 N N
5 C4' C5' C C sing 1.53 N N
6 C4' C3' C C sing 1.53 N N
7 C5' O5' C O sing 1.43 N N
8 F3'' C3' F C sing 1.4 N N
9 C3' F3' C F sing 1.4 N N
10 C3' C2' C C sing 1.53 N N
11 C4 C5 C C sing 1.42 N N
12 C4 N3 C N sing 1.35 N N
13 C5 C6 C C doub 1.35 N N
14 O5' C1' O C sing 1.43 N N
15 O2A PA O P doub 1.48 N N
16 N3 C2 N C sing 1.35 N N
17 F2'' C2' F C sing 1.4 N N
18 C2' C1' C C sing 1.53 N N
19 C2' F2' C F sing 1.4 N N
20 C6 N1 C N sing 1.37 N N
21 C1' O3B C O sing 1.43 N N
22 C2 N1 C N sing 1.35 N N
23 C2 O2 C O doub 1.22 N N
24 O3B PB O P sing 1.61 N N
25 PA O1A P O sing 1.61 N N
26 PA O5D P O sing 1.61 N N
27 PA O3A P O sing 1.61 N N
28 N1 C1D N C sing 1.46 N N
29 O5D C5D O C sing 1.43 N N
30 O3A PB O P sing 1.61 N N
31 O4D C1D O C sing 1.44 N N
32 O4D C4D O C sing 1.44 N N
33 PB O1B P O doub 1.48 N N
34 PB O2B P O sing 1.61 N N
35 C1D C2D C C sing 1.54 N N
36 C5D C4D C C sing 1.53 N N
37 C4D C3D C C sing 1.55 N N
38 C2D C3D C C sing 1.55 N N
39 C2D O2D C O sing 1.43 N N
40 C3D O3D C O sing 1.43 N N
41 C4' H1 C H sing 1.09 N N
42 O4' H2 O H sing 0.97 N N
43 C5' H3 C H sing 1.09 N N
44 C6' H4 C H sing 1.09 N N
45 C6' H5 C H sing 1.09 N N
46 O6' H6 O H sing 0.97 N N
47 C1' H7 C H sing 1.09 N N
48 O2B H8 O H sing 0.97 N N
49 O1A H9 O H sing 0.97 N N
50 C5D H10 C H sing 1.09 N N
51 C5D H11 C H sing 1.09 N N
52 C4D H12 C H sing 1.09 N N
53 C3D H13 C H sing 1.09 N N
54 O3D H14 O H sing 0.97 N N
55 C2D H15 C H sing 1.09 N N
56 O2D H16 O H sing 0.97 N N
57 C1D H17 C H sing 1.09 N N
58 C6 H18 C H sing 1.08 N N
59 C5 H19 C H sing 1.08 N N
60 N3 H20 N H sing 0.97 N N