Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 3V1    

Bonds between two atoms of the molecule

Total Number of Bonds: 56


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N29 C28 N C trip 1.14 N N
2 C28 C27 C C sing 1.43 N N
3 O26 C25 O C doub 1.22 N N
4 CL16 C12 CL C sing 1.74 N N
5 N13 C12 N C doub 1.3 N Y
6 N13 C14 N C sing 1.31 N Y
7 C12 S11 C S sing 1.71 N Y
8 C15 C14 C C sing 1.51 N N
9 C14 C10 C C doub 1.36 N Y
10 C27 C25 C C sing 1.47 N N
11 C27 C30 C C doub 1.36 Z N
12 C25 N24 C N sing 1.35 N N
13 O9 C8 O C doub 1.22 N N
14 C20 C19 C C doub 1.38 N Y
15 C20 C21 C C sing 1.39 N Y
16 C19 C18 C C sing 1.39 N Y
17 S11 C10 S C sing 1.76 N Y
18 C10 C8 C C sing 1.47 N N
19 C8 N7 C N sing 1.35 N N
20 C32 C30 C C sing 1.51 N N
21 C32 C34 C C sing 1.53 N N
22 C32 C33 C C sing 1.53 N N
23 C30 O31 C O sing 1.34 N N
24 N24 C21 N C sing 1.4 N N
25 C21 C22 C C doub 1.39 N Y
26 C18 O17 C O sing 1.36 N N
27 C18 C23 C C doub 1.39 N Y
28 O17 C1 O C sing 1.36 N N
29 C6 C1 C C doub 1.39 N Y
30 C6 C5 C C sing 1.39 N Y
31 N7 C5 N C sing 1.4 N N
32 C34 C33 C C sing 1.53 N N
33 C1 C2 C C sing 1.39 N Y
34 C5 C4 C C doub 1.39 N Y
35 C22 C23 C C sing 1.38 N Y
36 C2 C3 C C doub 1.38 N Y
37 C4 C3 C C sing 1.38 N Y
38 C2 H1 C H sing 1.08 N N
39 C3 H2 C H sing 1.08 N N
40 C4 H3 C H sing 1.08 N N
41 C6 H4 C H sing 1.08 N N
42 N7 H5 N H sing 0.97 N N
43 C15 H6 C H sing 1.09 N N
44 C15 H7 C H sing 1.09 N N
45 C15 H8 C H sing 1.09 N N
46 C19 H9 C H sing 1.08 N N
47 C20 H10 C H sing 1.08 N N
48 C22 H11 C H sing 1.08 N N
49 C23 H12 C H sing 1.08 N N
50 N24 H13 N H sing 0.97 N N
51 O31 H14 O H sing 0.97 N N
52 C32 H15 C H sing 1.09 N N
53 C33 H16 C H sing 1.09 N N
54 C33 H17 C H sing 1.09 N N
55 C34 H18 C H sing 1.09 N N
56 C34 H19 C H sing 1.09 N N