Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
3ZP
Bonds between two atoms of the molecule
Total Number of Bonds: 141
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
C44
O16
C
O
sing
1.43
N
N
2
O16
C39
O
C
sing
1.43
N
N
3
C40
C39
C
C
sing
1.53
N
N
4
C40
O15
C
O
sing
1.43
N
N
5
C40
C41
C
C
sing
1.53
N
N
6
C39
C38
C
C
sing
1.53
N
N
7
C
C1
C
C
sing
1.53
N
N
8
C41
O14
C
O
sing
1.43
N
N
9
C41
C42
C
C
sing
1.53
N
N
10
C1
C2
C
C
sing
1.53
N
N
11
O12
C38
O
C
sing
1.43
N
N
12
O12
C37
O
C
sing
1.43
N
N
13
C38
O13
C
O
sing
1.43
N
N
14
C2
O2
C
O
sing
1.45
N
N
15
C2
C3
C
C
sing
1.53
N
N
16
O13
C42
O
C
sing
1.43
N
N
17
C42
C43
C
C
sing
1.53
N
N
18
C37
C3
C
C
sing
1.53
N
N
19
O2
C16
O
C
sing
1.34
N
N
20
C3
C4
C
C
sing
1.51
N
N
21
O1
C16
O
C
doub
1.21
N
N
22
C16
C15
C
C
sing
1.51
N
N
23
C4
C5
C
C
doub
1.34
E
N
24
C15
C14
C
C
sing
1.53
N
N
25
O3
C14
O
C
sing
1.43
N
N
26
C5
C36
C
C
sing
1.51
N
N
27
C5
C6
C
C
sing
1.46
N
N
28
C14
C13
C
C
sing
1.53
N
N
29
C6
C7
C
C
doub
1.36
E
N
30
C17
C13
C
C
sing
1.53
N
N
31
C13
C12
C
C
sing
1.53
N
N
32
O11
C34
O
C
doub
1.21
N
N
33
C7
C8
C
C
sing
1.41
N
N
34
C12
C11
C
C
sing
1.53
N
N
35
C12
O4
C
O
sing
1.43
N
N
36
O
C8
O
C
doub
1.21
N
N
37
C34
C33
C
C
sing
1.51
N
N
38
C11
C33
C
C
sing
1.53
N
N
39
C11
C10
C
C
sing
1.53
N
N
40
C8
C9
C
C
sing
1.51
N
N
41
C23
C22
C
C
sing
1.53
N
N
42
O5
C22
O
C
sing
1.43
N
N
43
O5
C18
O
C
sing
1.43
N
N
44
O4
C18
O
C
sing
1.43
N
N
45
C22
C21
C
C
sing
1.53
N
N
46
C18
C19
C
C
sing
1.53
N
N
47
C10
C9
C
C
sing
1.53
N
N
48
C9
C35
C
C
sing
1.53
N
N
49
O6
C21
O
C
sing
1.43
N
N
50
O6
C24
O
C
sing
1.43
N
N
51
C21
C20
C
C
sing
1.53
N
N
52
C19
O10
C
O
sing
1.43
N
N
53
C19
C20
C
C
sing
1.53
N
N
54
C24
C25
C
C
sing
1.53
N
N
55
C24
O7
C
O
sing
1.43
N
N
56
C20
N
C
N
sing
1.47
N
N
57
C25
C26
C
C
sing
1.53
N
N
58
O7
C28
O
C
sing
1.43
N
N
59
N
C31
N
C
sing
1.47
N
N
60
N
C32
N
C
sing
1.47
N
N
61
C26
O9
C
O
sing
1.43
N
N
62
C26
C30
C
C
sing
1.53
N
N
63
C26
C27
C
C
sing
1.53
N
N
64
C28
C27
C
C
sing
1.53
N
N
65
C28
C29
C
C
sing
1.53
N
N
66
C27
O8
C
O
sing
1.43
N
N
67
C1
H1
C
H
sing
1.09
N
N
68
C1
H2
C
H
sing
1.09
N
N
69
C2
H3
C
H
sing
1.09
N
N
70
C3
H4
C
H
sing
1.09
N
N
71
O3
H5
O
H
sing
0.97
N
N
72
C4
H6
C
H
sing
1.08
N
N
73
C6
H7
C
H
sing
1.08
N
N
74
C7
H8
C
H
sing
1.08
N
N
75
C9
H9
C
H
sing
1.09
N
N
76
C10
H10
C
H
sing
1.09
N
N
77
C10
H11
C
H
sing
1.09
N
N
78
C11
H12
C
H
sing
1.09
N
N
79
C12
H13
C
H
sing
1.09
N
N
80
C13
H14
C
H
sing
1.09
N
N
81
C14
H15
C
H
sing
1.09
N
N
82
C15
H16
C
H
sing
1.09
N
N
83
C15
H17
C
H
sing
1.09
N
N
84
C34
H18
C
H
sing
1.08
N
N
85
C33
H19
C
H
sing
1.09
N
N
86
C33
H20
C
H
sing
1.09
N
N
87
C18
H21
C
H
sing
1.09
N
N
88
C22
H22
C
H
sing
1.09
N
N
89
C23
H23
C
H
sing
1.09
N
N
90
C23
H24
C
H
sing
1.09
N
N
91
C23
H25
C
H
sing
1.09
N
N
92
C21
H26
C
H
sing
1.09
N
N
93
C24
H27
C
H
sing
1.09
N
N
94
C28
H28
C
H
sing
1.09
N
N
95
C29
H29
C
H
sing
1.09
N
N
96
C29
H30
C
H
sing
1.09
N
N
97
C29
H31
C
H
sing
1.09
N
N
98
C27
H32
C
H
sing
1.09
N
N
99
O8
H33
O
H
sing
0.97
N
N
100
O9
H34
O
H
sing
0.97
N
N
101
C30
H35
C
H
sing
1.09
N
N
102
C30
H36
C
H
sing
1.09
N
N
103
C30
H37
C
H
sing
1.09
N
N
104
C25
H38
C
H
sing
1.09
N
N
105
C25
H39
C
H
sing
1.09
N
N
106
C20
H40
C
H
sing
1.09
N
N
107
C32
H42
C
H
sing
1.09
N
N
108
C32
H43
C
H
sing
1.09
N
N
109
C32
H44
C
H
sing
1.09
N
N
110
C31
H45
C
H
sing
1.09
N
N
111
C31
H46
C
H
sing
1.09
N
N
112
C31
H47
C
H
sing
1.09
N
N
113
C19
H48
C
H
sing
1.09
N
N
114
O10
H49
O
H
sing
0.97
N
N
115
C17
H50
C
H
sing
1.09
N
N
116
C17
H51
C
H
sing
1.09
N
N
117
C17
H52
C
H
sing
1.09
N
N
118
C
H53
C
H
sing
1.09
N
N
119
C
H54
C
H
sing
1.09
N
N
120
C
H55
C
H
sing
1.09
N
N
121
C35
H56
C
H
sing
1.09
N
N
122
C35
H57
C
H
sing
1.09
N
N
123
C35
H58
C
H
sing
1.09
N
N
124
C36
H59
C
H
sing
1.09
N
N
125
C36
H60
C
H
sing
1.09
N
N
126
C36
H61
C
H
sing
1.09
N
N
127
C37
H62
C
H
sing
1.09
N
N
128
C37
H63
C
H
sing
1.09
N
N
129
C38
H64
C
H
sing
1.09
N
N
130
C42
H65
C
H
sing
1.09
N
N
131
C43
H66
C
H
sing
1.09
N
N
132
C43
H67
C
H
sing
1.09
N
N
133
C43
H68
C
H
sing
1.09
N
N
134
C41
H69
C
H
sing
1.09
N
N
135
O14
H70
O
H
sing
0.97
N
N
136
C40
H71
C
H
sing
1.09
N
N
137
O15
H72
O
H
sing
0.97
N
N
138
C39
H73
C
H
sing
1.09
N
N
139
C44
H74
C
H
sing
1.09
N
N
140
C44
H75
C
H
sing
1.09
N
N
141
C44
H76
C
H
sing
1.09
N
N