Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 484    

Bonds between two atoms of the molecule

Total Number of Bonds: 76


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C28 C26 C C sing 1.53 N N
2 C29 C25 C C sing 1.53 N N
3 C26 C24 C C sing 1.53 N N
4 C25 C24 C C sing 1.53 N N
5 C24 O2 C O sing 1.43 N N
6 C24 C16 C C sing 1.51 N N
7 C13 C16 C C doub 1.38 N Y
8 C13 C9 C C sing 1.38 N Y
9 C16 C12 C C sing 1.38 N Y
10 C9 C7 C C doub 1.39 N Y
11 C12 C11 C C doub 1.38 N Y
12 C7 C11 C C sing 1.39 N Y
13 C7 C18 C C sing 1.48 N N
14 C11 C15 C C sing 1.51 N N
15 C17 C18 C C doub 1.39 N Y
16 C17 C14 C C sing 1.38 N Y
17 C18 C19 C C sing 1.39 N Y
18 C27 C14 C C sing 1.51 N N
19 C27 C10 C C sing 1.53 N N
20 C15 C22 C C sing 1.53 N N
21 C14 C21 C C doub 1.38 N Y
22 C6 C1 C C doub 1.38 N Y
23 C6 C5 C C sing 1.38 N Y
24 C1 C2 C C sing 1.38 N Y
25 O53 C52 O C sing 1.43 N N
26 C5 C4 C C doub 1.38 N Y
27 C5 C10 C C sing 1.51 N N
28 C19 C8 C C sing 1.51 N N
29 C19 C20 C C doub 1.38 N Y
30 C2 C52 C C sing 1.51 N N
31 C2 C3 C C doub 1.38 N Y
32 C4 C3 C C sing 1.38 N Y
33 C3 C48 C C sing 1.51 N N
34 C21 C20 C C sing 1.38 N Y
35 C22 C23 C C sing 1.53 N N
36 C48 O49 C O sing 1.43 N N
37 C1 H1 C H sing 1.08 N N
38 C4 H2 C H sing 1.08 N N
39 C6 H3 C H sing 1.08 N N
40 C48 H4 C H sing 1.09 N N
41 C48 H5 C H sing 1.09 N N
42 O49 H6 O H sing 0.97 N N
43 C52 H7 C H sing 1.09 N N
44 C52 H8 C H sing 1.09 N N
45 O53 H9 O H sing 0.97 N N
46 C10 H10 C H sing 1.09 N N
47 C10 H11 C H sing 1.09 N N
48 C27 H12 C H sing 1.09 N N
49 C27 H13 C H sing 1.09 N N
50 C17 H14 C H sing 1.08 N N
51 C20 H15 C H sing 1.08 N N
52 C21 H16 C H sing 1.08 N N
53 C8 H17 C H sing 1.09 N N
54 C8 H18 C H sing 1.09 N N
55 C8 H19 C H sing 1.09 N N
56 C9 H20 C H sing 1.08 N N
57 C12 H21 C H sing 1.08 N N
58 C13 H22 C H sing 1.08 N N
59 C15 H23 C H sing 1.09 N N
60 C15 H24 C H sing 1.09 N N
61 C25 H25 C H sing 1.09 N N
62 C25 H26 C H sing 1.09 N N
63 C26 H27 C H sing 1.09 N N
64 C26 H28 C H sing 1.09 N N
65 O2 H29 O H sing 0.97 N N
66 C28 H30 C H sing 1.09 N N
67 C28 H31 C H sing 1.09 N N
68 C28 H32 C H sing 1.09 N N
69 C29 H33 C H sing 1.09 N N
70 C29 H34 C H sing 1.09 N N
71 C29 H35 C H sing 1.09 N N
72 C22 H36 C H sing 1.09 N N
73 C22 H37 C H sing 1.09 N N
74 C23 H38 C H sing 1.09 N N
75 C23 H39 C H sing 1.09 N N
76 C23 H40 C H sing 1.09 N N